RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CR2P20023 1033 aa12□□□□□ -0.49
NEK9-201ENST00000238616 ENDOGQ14249 297 aaKnown RBP12□□□□□ -0.49
NEK9-201ENST00000238616 DUSP5Q16690 384 aa12□□□□□ -0.49
NEK9-201ENST00000238616 ZNF528Q3MIS6 628 aa12□□□□□ -0.49
NEK9-201ENST00000238616 LILRA3Q8N6C8 439 aaPredicted RBP12□□□□□ -0.49
NEK9-201ENST00000238616 SLC38A9Q8NBW4 561 aa12□□□□□ -0.49
NEK9-201ENST00000238616 WSB2Q9NYS7 404 aaPredicted RBP12□□□□□ -0.49
NEK9-201ENST00000238616 PCOLCE2Q9UKZ9 415 aa12□□□□□ -0.49
NEK9-201ENST00000238616 RFPL4AA6NLU0 287 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 RFPL4AL1F8VTS6 287 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 PAPLNO95428 1278 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 CD1BP29016 333 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 TMUB2Q71RG4 321 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 OR1J1Q8NGS3 322 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 SORT1Q99523 831 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 ST3GAL6Q9Y274 331 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 NEURL1O76050 574 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 PMS2P2O95744 297 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 CHRM2P08172 466 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 CD200P41217 278 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 HNRNPA3P51991 378 aaKnown RBP11.99□□□□□ -0.49
NEK9-201ENST00000238616 PAX5Q02548 391 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 KIAA0141Q14154 515 aaPredicted RBP11.99□□□□□ -0.49
NEK9-201ENST00000238616 CABLES2Q9BTV7 478 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 CHRDL1Q9BU40 450 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 PLA2G3Q9NZ20 509 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 LSAMPQ13449 338 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 ZNF787Q6DD87 383 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 RBM45Q8IUH3 476 aaKnown RBP11.99□□□□□ -0.49
NEK9-201ENST00000238616 PLPP6Q8IY26 295 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 ST8SIA5O15466 376 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 ZNF354AO60765 605 aaPredicted RBP11.99□□□□□ -0.49
NEK9-201ENST00000238616 HOXC8P31273 242 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 CBLL1Q75N03 491 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 OR5A2Q8NGI9 324 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 UBALD1Q8TB05 177 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 EVA1AQ9H8M9 152 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 MED17Q9NVC6 651 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 COA4Q9NYJ1 87 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 SPRY1O43609 319 aaPredicted RBP11.99□□□□□ -0.49
NEK9-201ENST00000238616 CTNSO60931 367 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 PCBP4P57723 403 aaKnown RBP11.99□□□□□ -0.49
NEK9-201ENST00000238616 CSNK1G2P78368 415 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 CCL7P80098 99 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 C20orf141Q9NUB4 165 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 B3GALT5Q9Y2C3 310 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 LRP3O75074 770 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 ZGLP1P0C6A0 271 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 LSM11P83369 360 aaKnown RBP eCLIP11.99□□□□□ -0.494e-6■■□□□ 11.5
NEK9-201ENST00000238616 REEP5Q00765 189 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 ARHGDIGQ99819 225 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 DUSP22Q9NRW4 184 aa11.99□□□□□ -0.49
NEK9-201ENST00000238616 HELTA6NFD8 242 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 TMEM202A6NGA9 273 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 CLDN24A6NM45 220 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 PNPP00491 289 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 GCSHP23434 173 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 WFDC3Q8IUB2 231 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 ZC3H3Q8IXZ2 948 aaKnown RBP11.98□□□□□ -0.49
NEK9-201ENST00000238616 CLDN22Q8N7P3 220 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 IP6K3Q96PC2 410 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 B4GALT3O60512 393 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 KRASP01116 189 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 AKR1C3P42330 323 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 NEURL3Q96EH8 262 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 ALKBH3Q96Q83 286 aaPredicted RBP11.98□□□□□ -0.49
NEK9-201ENST00000238616 LPAR2Q9HBW0 351 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 CRYABP02511 175 aaKnown RBP11.98□□□□□ -0.49
NEK9-201ENST00000238616 SLC25A5P05141 298 aaKnown RBP11.98□□□□□ -0.49
NEK9-201ENST00000238616 CTXN2P0C2S0 81 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 ZNF766Q5HY98 468 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 RNASEKQ6P5S7 137 aaKnown RBP11.98□□□□□ -0.49
NEK9-201ENST00000238616 LINC00052Q96N35 136 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 SMIM7Q9BQ49 75 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 ZNF346Q9UL40 294 aaKnown RBP11.98□□□□□ -0.49
NEK9-201ENST00000238616 CHST2Q9Y4C5 530 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 GPRIN2O60269 458 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 SPEM2Q0P670 501 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 FAAP20Q6NZ36 180 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 LMO3Q8TAP4 145 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 SEBOXQ9HB31 216 aaPredicted RBP11.98□□□□□ -0.49
NEK9-201ENST00000238616 ADAM29Q9UKF5 820 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 SHANK1Q9Y566 2161 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 PKDREJQ9NTG1 2253 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 RETREG3Q86VR2 466 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 LFNGQ8NES3 379 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 OR6S1Q8NH40 331 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 GPR87Q9BY21 358 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 TMPRSS13Q9BYE2 586 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 TMPRSS2O15393 492 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 ADRA2CP18825 462 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 SLC36A1Q7Z2H8 476 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 UBE3DQ7Z6J8 389 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 SLC25A32Q9H2D1 315 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 FECHP22830 423 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 MICBQ29980 383 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 SLC25A26Q70HW3 274 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 RTL10Q7L3V2 364 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms