RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 HOGA1Q86XE5 327 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 METTL21AQ8WXB1 218 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 FAM46BQ96A09 425 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 G6PC2Q9NQR9 355 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 URB1O60287 2271 aaKnown RBP18.22■□□□□ 0.51
SNX3-201ENST00000230085 HPGDP15428 266 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 FBLP22087 321 aaKnown RBP18.22■□□□□ 0.51
SNX3-201ENST00000230085 CLN3Q13286 438 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 MOGAT2Q3SYC2 334 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 ACTBL2Q562R1 376 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 ZNF529Q6P280 563 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 FJX1Q86VR8 437 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 LURAP1LQ8IV03 231 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 KDF1Q8NAX2 398 aaPredicted RBP18.22■□□□□ 0.51
SNX3-201ENST00000230085 CT55Q8WUE5 264 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 SMIM8Q96KF7 97 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 AQP10Q96PS8 301 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 PTDSS2Q9BVG9 487 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 EGLN1Q9GZT9 426 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 DNAJB11Q9UBS4 358 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 POMT1Q9Y6A1 747 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 TMEM235A6NFC5 223 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 ONECUT2O95948 504 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 RPS27P42677 84 aaKnown RBP18.21■□□□□ 0.51
SNX3-201ENST00000230085 PNLIPRP2P54317 469 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 ACKR1Q16570 336 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 SCGB2B2Q4G0G5 96 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 VAX1Q5SQQ9 334 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 FAM69BQ5VUD6 431 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 TMEM151BQ8IW70 566 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 ZNF248Q8NDW4 579 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 OR4A4PQ8NGN8 299 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 SNIP1Q8TAD8 396 aaKnown RBP18.21■□□□□ 0.51
SNX3-201ENST00000230085 ZNF524Q96C55 264 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 SEC22AQ96IW7 307 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 C12orf57Q99622 126 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 RNF126Q9BV68 326 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 ESRP2Q9H6T0 727 aaKnown RBP18.21■□□□□ 0.51
SNX3-201ENST00000230085 RAB18Q9NP72 206 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 ACKR4Q9NPB9 350 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 TMED7Q9Y3B3 224 aa18.21■□□□□ 0.51
SNX3-201ENST00000230085 IGF2RP11717 2491 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 DNASE1L1P49184 302 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 SRSF6Q13247 344 aaKnown RBP18.2■□□□□ 0.5
SNX3-201ENST00000230085 ODF4Q2M2E3 257 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 MST1LQ2TV78 715 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 H3F3CQ6NXT2 135 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 MRPL14Q6P1L8 145 aaKnown RBP18.2■□□□□ 0.5
SNX3-201ENST00000230085 ARRDC1Q8N5I2 433 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 ELP5Q8TE02 316 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 USB1Q9BQ65 265 aaKnown RBP18.2■□□□□ 0.5
SNX3-201ENST00000230085 UQCC1Q9NVA1 299 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 LPAR3Q9UBY5 353 aa18.2■□□□□ 0.5
SNX3-201ENST00000230085 CGGBP1Q9UFW8 167 aaPredicted RBP18.2■□□□□ 0.5
SNX3-201ENST00000230085 LOC107986453A0A1B0GWG9 222 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 CCSO14618 274 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 SIGLEC5O15389 551 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 FADS1O60427 444 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 OR6A2O95222 327 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 SPARCP09486 303 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 MEOX2P50222 304 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 MMP16P51512 607 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 SLC37A1P57057 533 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 DCAF7P61962 342 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 EIF5AP63241 154 aaKnown RBP18.19■□□□□ 0.5
SNX3-201ENST00000230085 BLOC1S1P78537 153 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 GLO1Q04760 184 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 ERV3-1Q14264 604 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 NNATQ16517 81 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 NKPD1Q17RQ9 610 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 CDNFQ49AH0 187 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 AVPI1Q5T686 147 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 SLC35D2Q76EJ3 337 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 TRAPPC6BQ86SZ2 158 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 VASH2Q86V25 355 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 OR13C3Q8NGS6 347 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 KCNE4Q8WWG9 221 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 FARSAQ9Y285 508 aaKnown RBP18.19■□□□□ 0.5
SNX3-201ENST00000230085 C9J4A7 227 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 PRSS44E7EML9 344 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 TERTO14746 1132 aaKnown RBP18.19■□□□□ 0.5
SNX3-201ENST00000230085 GPANK1O95872 356 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 ERCC1P07992 297 aaPredicted RBP18.19■□□□□ 0.5
SNX3-201ENST00000230085 PGAM2P15259 253 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 CTLA4P16410 223 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 CXCR1P25024 350 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 AIMP2Q13155 320 aaKnown RBP18.19■□□□□ 0.5
SNX3-201ENST00000230085 EIF2B1Q14232 305 aaKnown RBP18.19■□□□□ 0.5
SNX3-201ENST00000230085 TMEM128Q5BJH2 165 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 PRSS54Q6PEW0 395 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 SHISA6Q6ZSJ9 500 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 OR51A2Q8NGJ7 313 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 ADAMTS17Q8TE56 1095 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 TLNRD1Q9H1K6 362 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 OR52A1Q9UKL2 312 aa18.19■□□□□ 0.5
SNX3-201ENST00000230085 A6NIZ1 184 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 TO15178 435 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 KLK10O43240 276 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 CHRM2P08172 466 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 EIF2S3P41091 472 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms