RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SOCS1O15524 211 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 CDC14BO60729 498 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 PLATP00750 562 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 GP1BAP07359 652 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 HIST1H1DP16402 221 aaKnown RBP14.39□□□□□ -0.11
LTBR-201ENST00000228918 CCL1P22362 96 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 SMAD2Q15796 467 aaKnown RBP14.39□□□□□ -0.11
LTBR-201ENST00000228918 FAM69BQ5VUD6 431 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 ZNF574Q6ZN55 896 aaPredicted RBP14.39□□□□□ -0.11
LTBR-201ENST00000228918 PGAP1Q75T13 922 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 NAA40Q86UY6 237 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 TMEM17Q86X19 198 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 INO80EQ8NBZ0 244 aaPredicted RBP14.39□□□□□ -0.11
LTBR-201ENST00000228918 ELP5Q8TE02 316 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 RAB3CQ96E17 227 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 METTL7AQ9H8H3 244 aa14.39□□□□□ -0.11
LTBR-201ENST00000228918 F5H0A9 414 aaPredicted RBP14.38□□□□□ -0.11
LTBR-201ENST00000228918 TOX3O15405 576 aaPredicted RBP14.38□□□□□ -0.11
LTBR-201ENST00000228918 ZNF17P17021 662 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 AFF3P51826 1226 aaKnown RBP14.38□□□□□ -0.11
LTBR-201ENST00000228918 VAX1Q5SQQ9 334 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 CARD17Q5XLA6 110 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 TMEM71Q6P5X7 295 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 OR6X1Q8NH79 312 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 KCNG3Q8TAE7 436 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 TMEM41AQ96HV5 264 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 PHF7Q9BWX1 381 aaPredicted RBP14.38□□□□□ -0.11
LTBR-201ENST00000228918 TMEM59Q9BXS4 323 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 CHMP1AQ9HD42 196 aaPredicted RBP14.38□□□□□ -0.11
LTBR-201ENST00000228918 RER1O15258 196 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 BCAT2O15382 392 aaPredicted RBP14.38□□□□□ -0.11
LTBR-201ENST00000228918 SIGLEC5O15389 551 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 PSMB6P28072 239 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 SERPINF1P36955 418 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 S100A12P80511 92 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 ACY1Q03154 408 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 SIGLEC14Q08ET2 396 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 ACTBL2Q562R1 376 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 OR2M3Q8NG83 312 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 TERB2Q8NHR7 220 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 DNASE2BQ8WZ79 361 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 FAM71F1Q96KD3 344 aaPredicted RBP14.38□□□□□ -0.11
LTBR-201ENST00000228918 OR5B2Q96R09 309 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 OR6C1Q96RD1 312 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 MYOTQ9UBF9 498 aa14.38□□□□□ -0.11
LTBR-201ENST00000228918 A0A1W2PP11 408 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 C5orf51A6NDU8 294 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 FAM74A7A6NL05 159 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 CEACAM18A8MTB9 384 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 SIGLEC6O43699 453 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 OR2J2O76002 312 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 H2AFB1P0C5Y9 115 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 CX3CR1P49238 355 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 TMEM50BP56557 158 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 KCNMB1Q16558 191 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 FAM74A3Q4VXF1 159 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 PDSS1Q5T2R2 415 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 CPEB2Q7Z5Q1 589 aaKnown RBP14.37□□□□□ -0.11
LTBR-201ENST00000228918 ARRDC1Q8N5I2 433 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 BPIFCQ8NFQ6 507 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 OR4K17Q8NGC6 315 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 NMES1Q9C002 83 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 FAM117AQ9C073 453 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 BANF2Q9H503 90 aa14.37□□□□□ -0.11
LTBR-201ENST00000228918 TRBV6-7A0A0A0MS04 114 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 RAMP1O60894 148 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 SCRG1O75711 98 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 RAD51DO75771 328 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 ZFAND5O76080 213 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 HCKP08631 526 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 HIST3H3Q16695 136 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 PNLIPRP3Q17RR3 467 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 TMEM128Q5BJH2 165 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 TMEM185AQ8NFB2 350 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 STOML3Q8TAV4 291 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 SSC4DQ8WTU2 575 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 TMEM230Q96A57 120 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 LRRC46Q96FV0 321 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 CYYR1Q96J86 154 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 OXGR1Q96P68 337 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 C5orf66Q9H5L9 145 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 PURGQ9UJV8 347 aaKnown RBP14.36□□□□□ -0.11
LTBR-201ENST00000228918 GPR132Q9UNW8 380 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 CSAG2Q9Y5P2 127 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 C13orf42A0A1B0GVH6 325 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 MFNGO00587 321 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 PGAM2P15259 253 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 DCDP81605 110 aaKnown RBP14.36□□□□□ -0.11
LTBR-201ENST00000228918 MC2RQ01718 297 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 ZNF239Q16600 458 aaKnown RBP14.36□□□□□ -0.11
LTBR-201ENST00000228918 FAM57BQ71RH2 274 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 DOK3Q7L591 496 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 OR5AP2Q8NGF4 316 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 PIK3IP1Q96FE7 263 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 PIGMQ9H3S5 423 aa14.36□□□□□ -0.11
LTBR-201ENST00000228918 TEX13DA0A0J9YY54 714 aaPredicted RBP14.35□□□□□ -0.11
LTBR-201ENST00000228918 F8VVB4 439 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 F8VWA3 439 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 KCNAB3O43448 404 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 QDPRP09417 244 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms