RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 VWA8A3KMH1 1905 aa13.01□□□□□ -0.33
PRDM4-201ENST00000228437 HSPA12AO43301 675 aa13.01□□□□□ -0.33
PRDM4-201ENST00000228437 RPL27P61353 136 aaKnown RBP13.01□□□□□ -0.33
PRDM4-201ENST00000228437 SDK2Q58EX2 2172 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 SCN10AQ9Y5Y9 1956 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 FAM230AA0A1W2PPH8 454 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF705FA8MVS1 300 aaPredicted RBP13□□□□□ -0.33
PRDM4-201ENST00000228437 NUDT19A8MXV4 375 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF587BE7ETH6 402 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 CD74P04233 296 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF705DP0CH99 300 aaPredicted RBP13□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF705BP0CI00 300 aaPredicted RBP13□□□□□ -0.33
PRDM4-201ENST00000228437 VEGFBP49765 207 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 PDCD1Q15116 288 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 FAM78AQ5JUQ0 283 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF343Q6P1L6 599 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 FOXQ1Q9C009 403 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 SCN5AQ14524 2016 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 H0YIZ8 118 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 ADAM10O14672 748 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF16P17020 682 aaPredicted RBP13□□□□□ -0.33
PRDM4-201ENST00000228437 RAB38P57729 211 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 HHEXQ03014 270 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 HMGN3Q15651 99 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 NSDHLQ15738 373 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 RTN4RL2Q86UN3 420 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 OR52N5Q8NH56 324 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 STT3BQ8TCJ2 826 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 COX14Q96I36 57 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 ZBP1Q9H171 429 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 ZSWIM8A7E2V4 1837 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 NIPSNAP3BQ9BS92 247 aa13□□□□□ -0.33
PRDM4-201ENST00000228437 COLCA2A8K830 154 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 NUDT21O43809 227 aaKnown RBP12.99□□□□□ -0.33
PRDM4-201ENST00000228437 CTSBP07858 339 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 C5AR1P21730 350 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 PPICP45877 212 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 MRPS34P82930 218 aaKnown RBP12.99□□□□□ -0.33
PRDM4-201ENST00000228437 RUNX3Q13761 415 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 ZDHHC22Q8N966 263 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 ADAMTS18Q8TE60 1221 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF764Q96H86 408 aaPredicted RBP12.99□□□□□ -0.33
PRDM4-201ENST00000228437 PRRX2Q99811 253 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 WWTR1Q9GZV5 400 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 LANCL2Q9NS86 450 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 KLRF1Q9NZS2 232 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 TMED7-TICAM2A0A0A6YYA0 188 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 CD8AP01732 235 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 SLC37A1P57057 533 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 RPL23AP62750 156 aaKnown RBP12.99□□□□□ -0.33
PRDM4-201ENST00000228437 ALG11Q2TAA5 492 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 Q3ZCU0 254 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 MRPL41Q8IXM3 137 aaKnown RBP12.99□□□□□ -0.33
PRDM4-201ENST00000228437 OR56B1Q8NGI3 324 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 RNF128Q8TEB7 428 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 PDE7BQ9NP56 450 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 C19orf12Q9NSK7 152 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 PCOLCE2Q9UKZ9 415 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 FNDC1Q4ZHG4 1894 aaPredicted RBP12.99□□□□□ -0.33
PRDM4-201ENST00000228437 TRBV5-5A0A0J9YX44 114 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 A0A0U1RQK1 487 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 SOX15O60248 233 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 CST7O76096 145 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 SFT2D2O95562 160 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 CST4P01036 141 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 HEXBP07686 556 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 FCGR2AP12318 317 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 BIDP55957 195 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 MLF1P58340 268 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 C20orf196Q8IYI0 205 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF610Q8N9Z0 462 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 IER2Q9BTL4 223 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 SHISA8B8ZZ34 492 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 PHF1O43189 567 aaPredicted RBP12.99□□□□□ -0.33
PRDM4-201ENST00000228437 KLK2P20151 261 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 GJA4P35212 333 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 KCNG3Q8TAE7 436 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 ASB13Q8WXK3 278 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 WASF3Q9UPY6 502 aa12.99□□□□□ -0.33
PRDM4-201ENST00000228437 H3BP45 60 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 MFNGO00587 321 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 RBMXL2O75526 392 aaKnown RBP12.98□□□□□ -0.33
PRDM4-201ENST00000228437 CISD3P0C7P0 127 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 DRD3P35462 400 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 SURF2Q15527 256 aaPredicted RBP12.98□□□□□ -0.33
PRDM4-201ENST00000228437 CDCP2Q5VXM1 449 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF595Q8IYB9 648 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 OR10A2Q9H208 303 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 ALPK3Q96L96 1907 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 A0A0J9YY10 115 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 LOC101059948A0A1B0GTJ6 334 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 ADH1BP00325 375 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 OR3A4PP47883 348 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF426Q9BUY5 554 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF442Q9H7R0 627 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
PRDM4-201ENST00000228437 LAMA2P24043 3122 aaKnown RBP12.98□□□□□ -0.33
PRDM4-201ENST00000228437 H0YIG0 161 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 VSIG8P0DPA2 414 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms