RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 SSX2Q16385 188 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 ZNF674Q2M3X9 581 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 ZNF542PQ5EBM4 170 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 C1QL3Q5VWW1 255 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 HIST2H3AQ71DI3 136 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 ZDHHC22Q8N966 263 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 LRRC75AQ8NAA5 344 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 OR13C3Q8NGS6 347 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 AQP3Q92482 292 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 MR1Q95460 341 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 KTI12Q96EK9 354 aaPredicted RBP12.53□□□□□ -0.4
SF1-201ENST00000227503 SSX3Q99909 188 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 CNTD2Q9H8S5 307 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 UNKLQ9H9P5 680 aaKnown RBP12.53□□□□□ -0.4
SF1-201ENST00000227503 PISDQ9UG56 409 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 EMC9Q9Y3B6 208 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 KIR2DS5A0A0G2JLQ3 304 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 A0A0G2JNG1 304 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 BTBD17A6NE02 478 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 KIR2DS3K7RE56 304 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 TERTO14746 1132 aaKnown RBP12.53□□□□□ -0.4
SF1-201ENST00000227503 SCGB1D2O95969 90 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 RNH1P13489 461 aaKnown RBP12.53□□□□□ -0.4
SF1-201ENST00000227503 SUPT4H1P63272 117 aaKnown RBP12.53□□□□□ -0.4
SF1-201ENST00000227503 ZP2Q05996 745 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 KIR2DS5Q14953 304 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 PRTGQ2VWP7 1150 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 CBLN3Q6UW01 205 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 AVL9Q8NBF6 648 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 OR56B1Q8NGI3 324 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 OR4K15Q8NH41 348 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
SF1-201ENST00000227503 MESP1Q9BRJ9 268 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 A0A087X0M5 115 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 A0A1B0GX30 115 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 EPOPA6NHQ4 379 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 ZNF726A6NNF4 738 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 SOD3P08294 240 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 HKR1P10072 659 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 CX3CR1P49238 355 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 RBP2P50120 134 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 SLC25A1P53007 311 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 LSM6P62312 80 aaKnown RBP12.52□□□□□ -0.4
SF1-201ENST00000227503 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 TMEM184AQ6ZMB5 413 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 COX15Q7KZN9 410 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 OOSP2Q86WS3 158 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 ERGIC1Q969X5 290 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 AQP10Q96PS8 301 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 RARRES2Q99969 163 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 PTGES2Q9H7Z7 377 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 SLC17A5Q9NRA2 495 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 HIF3AQ9Y2N7 669 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 HS3ST3A1Q9Y663 406 aa12.52□□□□□ -0.4
SF1-201ENST00000227503 SEC16AO15027 2179 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 KNG1P01042 644 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 IFNA17P01571 189 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 CXCL1P09341 107 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 QDPRP09417 244 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 GLRA1P23415 457 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 CDX1P47902 265 aaPredicted RBP12.52□□□□□ -0.41
SF1-201ENST00000227503 ASCL1P50553 236 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 CLDN6P56747 220 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 FUT7Q11130 342 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 ZNF74Q16587 644 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.52□□□□□ -0.41
SF1-201ENST00000227503 ZNF529Q6P280 563 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 DBX2Q6ZNG2 339 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 TGIF2LXQ8IUE1 241 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 OTOSQ8NHW6 89 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 DGAT2Q96PD7 388 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 OR10A5Q9H207 317 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 PRTFDC1Q9NRG1 225 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 LSM5Q9Y4Y9 91 aaKnown RBP12.52□□□□□ -0.41
SF1-201ENST00000227503 FLVCR1Q9Y5Y0 555 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 PHF3Q92576 2039 aaKnown RBP12.52□□□□□ -0.41
SF1-201ENST00000227503 CLPSP04118 112 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 DDTP30046 118 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 SNCAP37840 140 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.41
SF1-201ENST00000227503 C4orf17Q53FE4 359 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 ATG4DQ86TL0 474 aaPredicted RBP12.52□□□□□ -0.41
SF1-201ENST00000227503 STX12Q86Y82 276 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 C19orf47Q8N9M1 422 aaKnown RBP12.52□□□□□ -0.41
SF1-201ENST00000227503 LIPHQ8WWY8 451 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 OR8B4Q96RC9 309 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 ATG101Q9BSB4 218 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 SH3BGRL3Q9H299 93 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 SLCO5A1Q9H2Y9 848 aa12.52□□□□□ -0.41
SF1-201ENST00000227503 LDLRAD4O15165 306 aa12.51□□□□□ -0.41
SF1-201ENST00000227503 FABP4P15090 132 aa12.51□□□□□ -0.41
SF1-201ENST00000227503 FCGR2CP31995 323 aa12.51□□□□□ -0.41
SF1-201ENST00000227503 GNALP38405 381 aa12.51□□□□□ -0.41
SF1-201ENST00000227503 CD226Q15762 336 aa12.51□□□□□ -0.41
SF1-201ENST00000227503 FNDC7Q5VTL7 733 aa12.51□□□□□ -0.41
SF1-201ENST00000227503 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
SF1-201ENST00000227503 OR52N4Q8NGI2 321 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms