RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ADAT3Q96EY9 351 aaPredicted RBP19.6■□□□□ 0.73
CCDC9-201ENST00000221922 FAHD2AQ96GK7 314 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 LDAHQ9H6V9 325 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 ZNF160Q9HCG1 818 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 COMMD9Q9P000 198 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 A0A1B0GW55 424 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 SCGNO76038 276 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 CSN2P05814 226 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 QDPRP09417 244 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 DUX4L2P0CJ85 424 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 DUX4L3P0CJ86 424 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 DUX4L4P0CJ87 422 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 DUX4L5P0CJ88 424 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 DUX4L6P0CJ89 424 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 DUX4L7P0CJ90 424 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 MLF1P58340 268 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 RPS19BP1Q86WX3 136 aaKnown RBP19.6■□□□□ 0.73
CCDC9-201ENST00000221922 RELL2Q8NC24 303 aaPredicted RBP19.6■□□□□ 0.73
CCDC9-201ENST00000221922 CMBLQ96DG6 245 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 MRPS24Q96EL2 167 aaKnown RBP19.6■□□□□ 0.73
CCDC9-201ENST00000221922 CST11Q9H112 138 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 WDR13Q9H1Z4 485 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 ARRDC1-AS1Q9H2J1 176 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 DUX4Q9UBX2 424 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 TSPAN4O14817 238 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 BCL2L11O43521 198 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 STK17BO94768 372 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 VSIG8P0DPA2 414 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 ZNF20P17024 532 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 CDAP32320 146 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 DSCR4P56555 118 aaPredicted RBP19.59■□□□□ 0.73
CCDC9-201ENST00000221922 MFAP5Q13361 173 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 PPP1R1AQ13522 171 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 MOB3CQ70IA8 216 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 LOXL2Q9Y4K0 774 aa19.59■□□□□ 0.73
CCDC9-201ENST00000221922 KANTRA0A1W2PQU2 76 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 C9orf170A2RU37 121 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 EIF1BO60739 113 aaKnown RBP19.58■□□□□ 0.73
CCDC9-201ENST00000221922 RAMP1O60894 148 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 CCL3P10147 92 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 GVQW1Q8N7I0 195 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 PDCD10Q9BUL8 212 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 MS4A7Q9GZW8 240 aaPredicted RBP19.58■□□□□ 0.73
CCDC9-201ENST00000221922 BARX1Q9HBU1 254 aaPredicted RBP19.58■□□□□ 0.73
CCDC9-201ENST00000221922 PROK2Q9HC23 129 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 ASH2LQ9UBL3 628 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 SLC5A6Q9Y289 635 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 PLEKHA6Q9Y2H5 1048 aa19.58■□□□□ 0.73
CCDC9-201ENST00000221922 RNF222A6NCQ9 220 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 LIFP15018 202 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 ATF4P18848 351 aaPredicted RBP19.58■□□□□ 0.72
CCDC9-201ENST00000221922 TBPP20226 339 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 CD96P40200 585 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 CLDN17P56750 224 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 CHST4Q8NCG5 386 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 OR10K1Q8NGX5 313 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 PPP1R1CQ8WVI7 109 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 VRK1Q99986 396 aaPredicted RBP19.58■□□□□ 0.72
CCDC9-201ENST00000221922 ZPBPQ9BS86 351 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 PADI1Q9ULC6 663 aa19.58■□□□□ 0.72
CCDC9-201ENST00000221922 VPS13AQ96RL7 3174 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 CCSO14618 274 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 VAMP5O95183 116 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 GRB2P62993 217 aaKnown RBP19.57■□□□□ 0.72
CCDC9-201ENST00000221922 H3F3AP84243 136 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF273Q14593 569 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 SLC22A6Q4U2R8 563 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 OR52W1Q6IF63 320 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 ACOT7LQ6ZUV0 252 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 TMEM156Q8N614 296 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 OR51E1Q8TCB6 317 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 NUDCD2Q8WVJ2 157 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 PHYHIPLQ96FC7 376 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 LOXL4Q96JB6 756 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 DKKL1Q9UK85 242 aa19.57■□□□□ 0.72
CCDC9-201ENST00000221922 TMEM14DPA8MWL7 114 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 LIPCP11150 499 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 GUCA1AP43080 201 aaPredicted RBP19.56■□□□□ 0.72
CCDC9-201ENST00000221922 PRKXP51817 358 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 LSM6P62312 80 aaKnown RBP19.56■□□□□ 0.72
CCDC9-201ENST00000221922 RAET1LQ5VY80 246 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 PGAP1Q75T13 922 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 PPP1R32Q7Z5V6 425 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 OR13C9Q8NGT0 318 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 SEC22AQ96IW7 307 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 PHB2Q99623 299 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 NAA11Q9BSU3 229 aaPredicted RBP19.56■□□□□ 0.72
CCDC9-201ENST00000221922 STRADBQ9C0K7 418 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 HPF1Q9NWY4 346 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 FRYLO94915 3013 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF17P17021 662 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 HRH1P35367 487 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 CSNK1A1P48729 337 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 ATP1B3P54709 279 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF121P58317 390 aaPredicted RBP19.56■□□□□ 0.72
CCDC9-201ENST00000221922 IL13RA1P78552 427 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 OR10R2Q8NGX6 335 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 PNRC2Q9NPJ4 139 aaKnown RBP19.56■□□□□ 0.72
CCDC9-201ENST00000221922 TCFL5Q9UL49 500 aa19.56■□□□□ 0.72
CCDC9-201ENST00000221922 OR2AT4A6NND4 320 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms