RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 HCFC1R1Q9NWW0 138 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 AGRNO00468 2067 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 DOCK11Q5JSL3 2073 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 CCDC163A0A0D9SF12 145 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 A0A0U1RQK1 487 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 RNASEK-C17orf49H0YIS7 233 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 DCTN6O00399 190 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 MBTPS2O43462 519 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 YIF1AO95070 293 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 RNPS1Q15287 305 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 SSX1Q16384 188 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 BATFQ16520 125 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OR2A2Q6IF42 318 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 RNF175Q8N4F7 328 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OR5T1Q8NG75 326 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 APOBEC3DQ96AK3 386 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 ABHD14BQ96IU4 210 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 S1PR3Q99500 378 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ZNF225Q9UK10 706 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 YARS2Q9Y2Z4 477 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 ABCA7Q8IZY2 2146 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 CCDC187A0A096LP49 1063 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OTOL1A6NHN0 477 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 ZFP92A6NM28 416 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ZNF727A8MUV8 499 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 G3V3Q6 166 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 GATCO43716 136 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 PDGFBP01127 241 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 CLDN12P56749 244 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 SHBQ15464 509 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 MRM1Q6IN84 353 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.99□□□□□ -1.771e-6■■■■■ 28.5
CHD9-201ENST00000219084 NPEPL1Q8NDH3 523 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OR4F5Q8NH21 305 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 PELI1Q96FA3 418 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OR4F4Q96R69 305 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 SMIM7Q9BQ49 75 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 DECR2Q9NUI1 292 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ATXN7L1Q9ULK2 861 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 TOX3O15405 576 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 NUPL2O15504 423 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 CYTIPO60759 359 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 CLEC2LP0C7M8 214 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OMGP23515 440 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 GJA5P36382 358 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 RAB7AP51149 207 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 NTHL1P78549 312 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ZNF141Q15928 474 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ACKR1Q16570 336 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 PRR18Q8N4B5 295 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 RPS4Y2Q8TD47 263 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 FBLIM1Q8WUP2 373 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 PRR14Q9BWN1 585 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 UCK1Q9HA47 277 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 HEYLQ9NQ87 328 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 MRPS18AQ9NVS2 196 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 SLC22A13Q9Y226 551 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 NTNG1Q9Y2I2 539 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ZNF732B4DXR9 585 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 FAM227AF5H4B4 570 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 M0R082 166 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 UPK1AO00322 258 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 IGF2P01344 180 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 NPBWR1P48145 328 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ARL16Q0P5N6 197 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ZNF705AQ6ZN79 300 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 SEC22AQ96IW7 307 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 Q96M85 177 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 DERL3Q96Q80 235 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OR8B4Q96RC9 309 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 WWTR1Q9GZV5 400 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 LTBP1Q14766 1721 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 DHRS3O75911 302 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 GUSBP08236 651 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 INHBBP09529 407 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 HOXD11P31277 338 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 DSCR4P56555 118 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 OR8G1Q15617 311 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 RPL7L1Q6DKI1 246 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 SSX7Q7RTT5 188 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 TSEN54Q7Z6J9 526 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 NKAIN4Q8IVV8 208 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OSR2Q8N2R0 312 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 HSD17B11Q8NBQ5 300 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 BPIFCQ8NFQ6 507 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ZNF346Q9UL40 294 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 GAB2Q9UQC2 676 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 SIGLEC7Q9Y286 467 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 COA3Q9Y2R0 106 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 USF3Q68DE3 2245 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ANKRD20A5PA0PJZ0 165 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ASPDHA6ND91 283 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 AQP7P3A6NL99 342 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ATF1P18846 271 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 CLDN2P57739 230 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 UBE2IP63279 158 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 NAAAQ02083 359 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 TLE1Q04724 770 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 TMEM81Q6P7N7 255 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 RSPO2Q6UXX9 243 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms