RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 SHBQ15464 509 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 ACOT7LQ6ZUV0 252 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 LIN37Q96GY3 246 aaPredicted RBP10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 CACNA1GO43497 2377 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 IGHV5-10-1A0A0J9YXX1 117 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 FAM166BA8MTA8 275 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF250P15622 560 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 WDR87Q6ZQQ6 2873 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 LIPHQ8WWY8 451 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 ADAT3Q96EY9 351 aaPredicted RBP10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 KLHDC3Q9BQ90 382 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 SMOC1Q9H4F8 434 aa10.99□□□□□ -0.65
TM9SF4-201ENST00000217315 A6NLC8 198 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 K7EPK0 472 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 TO15178 435 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 MMP16P51512 607 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 PLA2G7Q13093 441 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 KISS1Q15726 138 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF684Q5T5D7 378 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 RTL6Q6ICC9 239 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 FAM71E2Q8N5Q1 922 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 OR8B12Q8NGG6 310 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 CPT1CQ8TCG5 803 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 RNF133Q8WVZ7 376 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 TMED6Q8WW62 240 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 RAB33BQ9H082 229 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF230Q9UIE0 474 aaPredicted RBP10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 KCNS2Q9ULS6 477 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 OR5H15A6NDH6 313 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 LEUTXA8MZ59 168 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 CBR3O75828 277 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 AQP8O94778 261 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 OR2F2O95006 317 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 ABHD16AO95870 558 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 GSTP1P09211 210 aaKnown RBP10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 OR8U9P0C7N5 309 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 VSIG10L2P0DP72 767 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 LIMK1P53667 647 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 OR2F1Q13607 317 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 TMEM255AQ5JRV8 349 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 OR2AE1Q8NHA4 323 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 IL1F10Q8WWZ1 152 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 ST8SIA2Q92186 375 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 THOC3Q96J01 351 aaKnown RBP10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 UQCC2Q9BRT2 126 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF286AQ9HBT8 521 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 ZFP64Q9NPA5 681 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 FAM86C1Q9NVL1 165 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 A0A1W2PPC1 479 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF354AO60765 605 aaPredicted RBP10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 PATE4P0C8F1 98 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 CAMLGP49069 296 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 RBP2P50120 134 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 SNTB1Q13884 538 aaKnown RBP10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 MKXQ8IYA7 352 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 CCDC71LQ8N9Z2 235 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 CLEC1AQ8NC01 280 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 GPX8Q8TED1 209 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 SGCZQ96LD1 299 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 CNTNAP3BQ96NU0 1288 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 UTP23Q9BRU9 249 aaKnown RBP10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF2Q9BSG1 426 aaPredicted RBP10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 CRLF2Q9HC73 371 aa10.98□□□□□ -0.65
TM9SF4-201ENST00000217315 OR2M5A3KFT3 312 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 RFPL4AA6NLU0 287 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 PATE3B3GLJ2 98 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 RFPL4AL1F8VTS6 287 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 TIAF1O95411 115 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 CD63P08962 238 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 NME2P22392 152 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 RPS18P62269 152 aaKnown RBP10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 ATPAF1Q5TC12 328 aaPredicted RBP10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 RAB11FIP2Q7L804 512 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF695Q8IW36 515 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 DTWD2Q8NBA8 298 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 MESP1Q9BRJ9 268 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 PRMT8Q9NR22 394 aaPredicted RBP10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 C1orf123Q9NWV4 160 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 A0A096LPE4 126 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 A0A1W2PPZ6 126 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 TOX3O15405 576 aaPredicted RBP10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 TSPAN15O95858 294 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 IGLV3-19P01714 112 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF44P15621 663 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 M6PRP20645 277 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 DSCR4P56555 118 aaPredicted RBP10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 ROM1Q03395 351 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 WIPI1Q5MNZ9 446 aaPredicted RBP10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 OR52H1Q8NGJ2 320 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 HGDQ93099 445 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 FAM131CQ96AQ9 280 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 LRFN1Q9P244 771 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 TRBV5-7A0A0A0MS05 114 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 D6RAR5 112 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 MED6O75586 246 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 TTRP02766 147 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 ZNF728P0DKX0 622 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 IL32P24001 234 aa10.97□□□□□ -0.65
TM9SF4-201ENST00000217315 PLAURQ03405 335 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms