RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 AQP3Q92482 292 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 ITFG2Q969R8 447 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 SEH1LQ96EE3 360 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 MRPS28Q9Y2Q9 187 aaKnown RBP12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 CFAP54Q96N23 3096 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 AQP7O14520 342 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 MELTFP08582 738 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 H2AFB2P0C5Z0 115 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 PSMB1P20618 241 aaKnown RBP12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 AGTR1P30556 359 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 CCR6P51684 374 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 ACTBP60709 375 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 ACTG1P63261 375 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 PABPC1L2AQ5JQF8 200 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 ATAD3CQ5T2N8 411 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 AWAT2Q6E213 333 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 OR10K2Q6IF99 312 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 PLXDC2Q6UX71 529 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 NUFIP2Q7Z417 695 aaKnown RBP12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 FGD2Q7Z6J4 655 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 SEMA6DQ8NFY4 1073 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 KCNG3Q8TAE7 436 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 SPSB4Q96A44 273 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 REEP6Q96HR9 211 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 C1QTNF5Q9BXJ0 243 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 GHITMQ9H3K2 345 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 MRPL15Q9P015 296 aaKnown RBP12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 UPB1Q9UBR1 384 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 PIGLQ9Y2B2 252 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 TGM6O95932 706 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 LCATP04180 440 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 CHRM2P08172 466 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 HCKP08631 526 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 NAT2P11245 290 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 FAHP16930 419 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 RRAS2P62070 204 aaPredicted RBP12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 PMP22Q01453 160 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 RIPPLY1Q0D2K3 151 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 UBE2V2Q15819 145 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 PCGF3Q3KNV8 242 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 TMEM255AQ5JRV8 349 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 TMEM42Q69YG0 159 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 CRIP3Q6Q6R5 217 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 GLIPR1L1Q6UWM5 242 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 SPSB1Q96BD6 273 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 CLCF1Q9UBD9 225 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
RTFDC1-201ENST00000023939 A0A0A6YYJ9 748 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 EFSO43281 561 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 XRCC2O43543 280 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 SS18L1O75177 396 aaPredicted RBP12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 ARR3P36575 388 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 OR3A2P47893 321 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 MECP2P51608 486 aaKnown RBP12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 RAB25P57735 213 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 GUCA2AQ02747 115 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 KISS1Q15726 138 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 MOGAT2Q3SYC2 334 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF260Q3ZCT1 412 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 RNF144BQ7Z419 303 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 TCTE3Q8IZS6 198 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 PNLDC1Q8NA58 520 aaKnown RBP12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 TMEM229BQ8NBD8 167 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 CPEB3Q8NE35 698 aaKnown RBP12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 AKAP1Q92667 903 aaKnown RBP eCLIP12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 B3GNT2Q9NY97 397 aa12.46□□□□□ -0.41
RTFDC1-201ENST00000023939 TRAV6A0A075B6T7 132 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 WIPF3A6NGB9 483 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 PRAF2O60831 178 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 PEX14O75381 377 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 NDUFB6O95139 128 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 ACKR3P25106 362 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 MPGP29372 298 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 OR3A4PP47883 348 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 OR8B8Q15620 311 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 GSG1Q2KHT4 349 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 ZBTB37Q5TC79 503 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 FBXW9Q5XUX1 488 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 SFRP4Q6FHJ7 346 aaPredicted RBP12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 TRAF4Q9BUZ4 470 aaPredicted RBP12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 LPAR5Q9H1C0 372 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 C20orf85Q9H1P6 137 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 NEK6Q9HC98 313 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 MOV10Q9HCE1 1003 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF407Q9C0G0 2248 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 hCG_38984A0A1B0GV85 526 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 CDC14BO60729 498 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 AKAIN1P0CW23 69 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 PRKACBP22694 351 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 PTGFRP43088 359 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 FOXG1P55316 489 aaPredicted RBP12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 TAS2R19P59542 299 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 FAPQ12884 760 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 TNK1Q13470 666 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF101Q8IZC7 436 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 ZADH2Q8N4Q0 377 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 FAM89BQ8N5H3 189 aa12.45□□□□□ -0.42
RTFDC1-201ENST00000023939 ACBD4Q8NC06 268 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms