RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PJVKQ0ZLH3 352 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 ARFRP1Q13795 201 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 FAHD2BQ6P2I3 314 aaPredicted RBP12.42□□□□□ -0.42
USH1C-201ENST00000005226 OR5AS1Q8N127 324 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 FAHD2AQ96GK7 314 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 NMES1Q9C002 83 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 MTIF3Q9H2K0 278 aaKnown RBP12.42□□□□□ -0.42
USH1C-201ENST00000005226 COA4Q9NYJ1 87 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 CTSFQ9UBX1 484 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 POLR1DQ9Y2S0 133 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 MMACHCQ9Y4U1 282 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 EFNA2O43921 213 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 HCKP08631 526 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 DHPSP49366 369 aaPredicted RBP12.42□□□□□ -0.42
USH1C-201ENST00000005226 BLKP51451 505 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 DCDP81605 110 aaKnown RBP12.42□□□□□ -0.42
USH1C-201ENST00000005226 SHHQ15465 462 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 PCK2Q16822 640 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 OR2A2Q6IF42 318 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 C1QL2Q7Z5L3 287 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 DTWD2Q8NBA8 298 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 OR1N1Q8NGS0 311 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 OR13G1Q8NGZ3 307 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 SMIM3Q9BZL3 60 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 ZNF304Q9HCX3 659 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 MMP26Q9NRE1 261 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 CARHSP1Q9Y2V2 147 aaKnown RBP12.42□□□□□ -0.42
USH1C-201ENST00000005226 WDFY3Q8IZQ1 3526 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 TRBV6-7A0A0A0MS04 114 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 TLCD2A6NGC4 264 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 CDC14BO60729 498 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 FOLR1P15328 257 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 CBR1P16152 277 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 CX3CR1P49238 355 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 FOXF1Q12946 379 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 C10orf91Q5T1B1 145 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 DNM1P34Q6PK57 102 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 TMPRSS9Q7Z410 1059 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 NAA40Q86UY6 237 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 DAZLQ92904 295 aaKnown RBP12.41□□□□□ -0.42
USH1C-201ENST00000005226 ZNF775Q96BV0 537 aaPredicted RBP12.41□□□□□ -0.42
USH1C-201ENST00000005226 C1orf147Q96MC9 270 aaPredicted RBP12.41□□□□□ -0.42
USH1C-201ENST00000005226 GPER1Q99527 375 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 NRIP2Q9BQI9 281 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 GPR84Q9NQS5 396 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 SLC22A11Q9NSA0 550 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 LPAR3Q9UBY5 353 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 MMP17Q9ULZ9 603 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 CABIN1Q9Y6J0 2220 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 A6NIZ1 184 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 E9PLN8 166 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 RER1O15258 196 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 MBTPS2O43462 519 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 MED6O75586 246 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 GLAP06280 429 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 KLK2P20151 261 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 FASLGP48023 281 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 ARL4DP49703 201 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 RAP1BP61224 184 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 RAP1AP62834 184 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 LIN37Q96GY3 246 aaPredicted RBP12.41□□□□□ -0.42
USH1C-201ENST00000005226 LHFPL6Q9Y693 200 aa12.41□□□□□ -0.42
USH1C-201ENST00000005226 A0A1W2PPC4 97 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 ZNF205O95201 554 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 SNAPINO95295 136 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 HIST1H1DP16402 221 aaKnown RBP12.4□□□□□ -0.42
USH1C-201ENST00000005226 AMY2BP19961 511 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 FBLP22087 321 aaKnown RBP12.4□□□□□ -0.42
USH1C-201ENST00000005226 CD80P33681 288 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 DCAF7P61962 342 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 PRSS54Q6PEW0 395 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 OR8B12Q8NGG6 310 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 OR5H2Q8NGV7 314 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 GLYATL2Q8WU03 294 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 UQCC2Q9BRT2 126 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 ZFP57Q9NU63 452 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 MYO7BQ6PIF6 2116 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 RNASEK-C17orf49H0YIS7 233 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 H3BMH7 237 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 TO15178 435 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 ZNF17P17021 662 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 DAP3P51398 398 aaKnown RBP12.4□□□□□ -0.42
USH1C-201ENST00000005226 ZNF121P58317 390 aaPredicted RBP12.4□□□□□ -0.42
USH1C-201ENST00000005226 TGIF1Q15583 401 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 DEGS2Q6QHC5 323 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 FBXO17Q96EF6 278 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 CRB3Q9BUF7 120 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 TMEM59Q9BXS4 323 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 CHST11Q9NPF2 352 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 RCC2Q9P258 522 aaKnown RBP12.4□□□□□ -0.42
USH1C-201ENST00000005226 ASH2LQ9UBL3 628 aa12.4□□□□□ -0.42
USH1C-201ENST00000005226 A0A1W2PNR3 127 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SFTA3P0C7M3 94 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 GIMD1P0DJR0 217 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 OR3A2P47893 321 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 AADACL3Q5VUY0 350 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 FAM57BQ71RH2 274 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SLC5A7Q9GZV3 580 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SLC26A1Q9H2B4 701 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms