RNA–Protein interactions for RNA: ENSMUST00000100064.8

Scn9a-202, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Scn9a, Length 9,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-202ENSMUST00000100064 Vmn1r30Q8R2D2 302 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Rfc3Q8R323 356 aaKnown RBP9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Nsa2Q9CR47 260 aaKnown RBP9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Pebp4Q9D9G2 242 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Prr36E9PV26 1098 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 H2-K1P01901 369 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Mcrip1Q3UGS4 97 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Lair1Q8BG84 263 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Prelid1Q8R107 217 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Tmem30aQ8VEK0 364 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Olfr56Q8VGD6 315 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Rpusd4Q9CWX4 377 aaKnown RBP9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 AF067061O70616 171 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Capns1O88456 269 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 IghgP01863 330 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Shox2P70390 331 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 CybaQ61462 192 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Tmem108Q8BHE4 574 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Olfr99Q8VFE4 305 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Nxph3Q91VX5 252 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Acox3Q9EPL9 700 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 C1qtnf3Q9ES30 246 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Cep250Q60952 2414 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Olfr574F8VQ18 346 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Gm4141K9J7H2 306 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Pla2g7Q60963 440 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Sez6Q7TSK2 991 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Mia3Q8BI84 1930 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Megf6Q80V70 1572 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn2r108E9PYS0 855 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Gm21761J3QK00 171 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 GzmfP08883 248 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Ccdc187Q8C5V8 958 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 NotumQ8R116 503 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Usp3Q91W36 520 aaKnown RBP9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r137D3YTY1 307 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r143E9PUW9 307 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r157E9Q069 297 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r139E9Q8L6 297 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 4930522L14RikE9QAG4 666 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r112G3UY48 297 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r135K9J7G0 307 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r125L7N227 307 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r116L7N2A6 307 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Lrrc28Q3TX51 367 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Clec7aQ6QLQ4 244 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Olfr924Q7TRB8 308 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Cnot2Q8C5L3 540 aaKnown RBP9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Babam2Q8K3W0 383 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Or51e2Q8VBV9 320 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Olfr790Q8VGJ3 322 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r100Q9EPS5 307 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Atg2bQ80XK6 2075 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 PpiaP17742 164 aaKnown RBP9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Htr2aP35363 471 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Gcnt2P97402 401 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Siah1bQ06985 282 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r237Q8R296 289 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Xylt2Q9EPL0 865 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 SnapinQ9Z266 136 aa9.53□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Olfr69E9Q7C5 316 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Vmn1r159K7N701 305 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Fcgr3P08508 261 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Slc10a2P70172 348 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Phox2aQ62066 280 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Bend7Q8BSV3 434 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 MdficQ8BX65 247 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Rnps1Q99M28 305 aaKnown RBP9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Lamtor1Q9CQ22 161 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Lyrm7Q9DA03 104 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Fut2Q9JL27 347 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Cited4Q9WUL8 182 aa9.52□□□□□ -0.88
Scn9a-202ENSMUST00000100064 Olfr1326-ps1A0A140T8J7 311 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 S100a3P62818 101 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Gm1587Q3UT80 123 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Trim23Q8BGX0 574 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Vmn1r48Q9EQ52 302 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Rpl27P61358 136 aaKnown RBP9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Thap4Q6P3Z3 569 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Elmod2Q8BGF6 293 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 F830045P16RikQ8BJ95 487 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Vmn1r226Q8R2A8 298 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Dnajc18Q9CZJ9 357 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Dll4Q9JI71 686 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Gm3045A0A1D5RMA1 209 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Mtnd4lP03903 98 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 NrasP08556 189 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Ctsll3Q3ULP7 331 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Lyg2Q3V1I0 213 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Slitrk5Q810B7 957 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Abhd11Q8K4F5 307 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Sp7Q8VI67 428 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Nrip2Q9JHR9 270 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Akip1Q9JJR5 212 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Olfr1274-psA0A1L1SQ02 309 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Cnr2P47936 347 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Nrsn2Q5HZK2 202 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Olfr517Q7TRU4 314 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 Olfr506Q7TRU6 314 aa9.52□□□□□ -0.89
Scn9a-202ENSMUST00000100064 H2-M10.3Q85ZW6 330 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms