RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Mid1ip1Q9CQ20 182 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 ItgaxQ9QXH4 1169 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Lhx6Q9R1R0 363 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gm15056F6ZR08 88 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 CideaO70302 217 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Tpt1P63028 172 aaKnown RBP12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Hs3st2Q673U1 367 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Adprhl1Q8BGK2 353 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Adipor2Q8BQS5 386 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Vrk3Q8K3G5 453 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 RangrfQ9JIB0 185 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Rnf32Q9JIT1 368 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Vmn1r82A0A087WRV1 305 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Trabd2bB1ATG9 517 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gcm2O09102 504 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Kcns1O35173 497 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Cbr2P08074 244 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Rpusd3Q14AI6 344 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Fzd7Q61090 572 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gpr153Q8K0Z9 631 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Vmn1r43Q8VIC9 329 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Lancl2Q9JJK2 450 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 D7Ertd443eD2J0Y4 644 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Olfr288E9Q1P2 318 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Oosp3G5E8D7 195 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Lhx8O35652 367 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Tgfb1P04202 390 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Inpp5jP59644 1003 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Rpl27P61358 136 aaKnown RBP12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Map2k6P70236 334 aaKnown RBP12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Fgf13P70377 245 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 B020004J07RikQ3UTC0 476 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Elavl2Q60899 360 aaKnown RBP12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 March1Q6NZQ8 289 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Adamtsl4Q80T21 1036 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Oraov1Q8CH62 137 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Tmem267Q8VDR5 215 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 EpcamQ99JW5 315 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Ube2dnl2A2AFH2 155 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Cd101A8E0Y8 1033 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Socs1O35716 212 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Hspb1P14602 209 aaKnown RBP12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Ptpmt1Q66GT5 193 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Cramp1Q6PG95 1285 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Olfr1113Q7TR54 326 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Cstl1Q80Y72 140 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Fbxl2Q8BH16 423 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Spns1Q8R0G7 528 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 BphlQ8R164 291 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Olfr656Q8VGX9 329 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Chrm5Q920H4 532 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Aig1Q9D8B1 262 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Phospho2Q9D9M5 241 aa12.8□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gm28557A0A087WQQ0 336 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gm572B1ARY8 399 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Vmn1r80L7N1Z3 308 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Fpr1P33766 364 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Nkx2-6P43688 289 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Adat3Q6PAT0 349 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Slc22a27Q76M72 551 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Olfr1357Q7TQU7 313 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Defb22Q8BVC1 179 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Vmn1r59Q8R2B9 310 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 MrgpreQ91ZB7 310 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Trappc2Q9CQP2 140 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Dmrt1Q9QZ59 374 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Col2a1P28481 1487 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Tmem182B2RVY9 229 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gm9047B9EJX3 177 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Olfr585E9PXW4 318 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gm14288E9Q9W0 88 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gm9602J3QPD5 205 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Foxd2O35392 492 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 IfngP01580 155 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Fxyd2Q04646 70 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Taar6Q5QD13 345 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Galnt2Q6PB93 570 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Chchd4Q8VEA4 139 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Ptov1Q91VU8 416 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Lcn8Q924P3 175 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Fuca1Q99LJ1 452 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Vps25Q9CQ80 176 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Cisd2Q9CQB5 135 aaKnown RBP12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Vmn1r90A0A087WR36 309 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gm20503G3UZK1 150 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 H2-T3P14432 384 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Rpl12P35979 165 aaKnown RBP12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 ApodP51910 189 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Ube2g2P60605 165 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Adra2cQ01337 458 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 BaxQ07813 192 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Gramd2aQ3V3G7 320 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Ltc4sQ60860 150 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 SrmQ64674 302 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Mus81Q91ZJ0 551 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Q9CWB7 115 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 MtfmtQ9D799 386 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Mfsd4b2Q9D8I5 366 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Znf346Q9R0B7 294 aa12.79□□□□□ -0.36
Col3a1-201ENSMUST00000087883 Olfr267A2AM35 313 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms