RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Med16Q6PGF3 828 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 PigtQ8BXQ2 582 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gramd1cQ8CI52 457 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 CcnqQ8QZR8 250 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr214Q8VG27 320 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr1297Q8VGE8 312 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Slc19a3Q99PL8 488 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Mrm2Q9CPY0 246 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Nudt21Q9CQF3 227 aaKnown RBP12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Mrpl21Q9D1N9 209 aaKnown RBP12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 FastkQ9JIX9 511 aa12.02□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Ice1E9Q286 2241 aaKnown RBP12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm4881A0A140LIR9 352 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Dmrta2A2A9A2 531 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm20403G3UYB0 123 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Tmem178bM0QWJ9 172 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Rpl18P35980 188 aaKnown RBP12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Fosl2P47930 326 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Fgf14P70379 247 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 ElocP83940 112 aaKnown RBP12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm10912Q3UXH0 145 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Znf511Q6P0X2 227 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Pgm2Q7TSV4 620 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Cnot4Q8BT14 575 aaKnown RBP12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 C1saQ8CG14 688 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr1008Q8VGC7 313 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 RabifQ91X96 123 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Ethe1Q9DCM0 254 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Kif26bQ7TNC6 2112 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 4931429L15RikE9PVU2 379 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Adap1E9PY16 374 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm7951E9Q0A2 213 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm6482F6YHC1 213 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm17124F6ZIG1 213 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Vmn1r67G5E8C1 305 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 LcatP16301 438 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 P2ry2P35383 373 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Tha1Q6XPS7 400 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Fgl1Q71KU9 314 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 HhipQ7TN16 700 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr374Q7TRY0 313 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 H2-M10.5Q85ZW7 330 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gfm1Q8K0D5 751 aaKnown RBP12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Chrnb4Q8R493 495 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr651Q8VG78 313 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr870Q8VGG4 311 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Dnajb11Q99KV1 358 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Lrrc51Q9DAK8 192 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Slc2a8Q9JIF3 477 aa12.01□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm4779A0A1B0GR91 561 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm266A6H634 200 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 I0C0044D17RikA6PWL3 169 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 AsmtD3KU66 387 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Vmn2r113E9PZA6 856 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Mcpt9O35164 246 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Crisp2P16563 243 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 EbpP70245 230 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 McptlQ00356 246 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Cbln2Q8BGU2 224 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Cox15Q8BJ03 413 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Akr1c18Q8K023 323 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Flvcr2Q91X85 551 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Mrgpra5Q91ZC7 304 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Rbm7Q9CQT2 265 aaKnown RBP12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Atg101Q9D8Z6 218 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Tex44Q9DA60 530 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Csnk1eQ9JMK2 416 aaKnown RBP12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Oc90Q9Z0L3 485 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr1130A0A1L1SQT2 314 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Col9a3A2ACT7 680 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr1129A2AV41 314 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Lao1B1ARV3 523 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm5799E9Q2M1 201 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Rnf148G3X9R7 316 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Rdh19G5E8H9 318 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Vmn1r94K7N6X3 305 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Gm8265K7N6Y8 158 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 HckP08103 524 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 P2rx1P51576 399 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Ctf2P83714 204 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr90Q0VEL5 310 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Fthl17dQ3SXD1 176 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Entpd6Q3U0P5 455 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Vdac3Q60931 283 aaKnown RBP12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Fzd3Q61086 666 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Wdr92Q8BGF3 357 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Lhfpl6Q8BM86 200 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Lrrn3Q8CBC6 707 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr1254Q8VFB1 314 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Olfr686Q8VGX3 317 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Med28Q920D3 178 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 B3galnt1Q920V1 331 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Fthl17Q99MX2 176 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Susd3Q9D176 269 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Tex33Q9D9J2 266 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Sectm1bQ9JL59 212 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Spry4Q9WTP2 300 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Cxcl15Q9WVL7 167 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Cdc34bA0A140T8I4 237 aa12□□□□□ -0.49
Prpf38b-201ENSMUST00000029480 Ajap1A2ALI5 412 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms