RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 MRPL15Q9P015 296 aaKnown RBP12.66□□□□□ -0.38
PHGDH-231ENST00000641939 OAZ3Q9UMX2 235 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 PCDHB10Q9UN67 800 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 FBN1P35555 2871 aaKnown RBP12.66□□□□□ -0.38
PHGDH-231ENST00000641939 CCDC182A6NF36 153 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 LRRC30A6NM36 301 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 GMDSO60547 372 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 EPHA2P29317 976 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 THBS2P35442 1172 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 MDH2P40926 338 aaKnown RBP12.65□□□□□ -0.38
PHGDH-231ENST00000641939 GATA4P43694 442 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 ACTR3P61158 418 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 FAM57BQ71RH2 274 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 SLC16A9Q7RTY1 509 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 PRSS45Q7RTY3 260 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 OR56B2PQ8NGI1 322 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 PYDC1Q8WXC3 89 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 ERGIC1Q969X5 290 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 SGK3Q96BR1 496 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 REEP6Q96HR9 211 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 CIB1Q99828 191 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 ADAT1Q9BUB4 502 aaKnown RBP12.65□□□□□ -0.38
PHGDH-231ENST00000641939 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 OR10A2Q9H208 303 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 G6PC2Q9NQR9 355 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 LAMP5Q9UJQ1 280 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 KLHDC2Q9Y2U9 406 aa12.65□□□□□ -0.38
PHGDH-231ENST00000641939 M0R129 80 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 EBAG9O00559 213 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 CYB5R3P00387 301 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-231ENST00000641939 ALOX5APP20292 161 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 CFL1P23528 166 aaKnown RBP12.64□□□□□ -0.39
PHGDH-231ENST00000641939 SRP14P37108 136 aaKnown RBP12.64□□□□□ -0.39
PHGDH-231ENST00000641939 DDOSTP39656 456 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 FAM3AP98173 230 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 KPNB1Q14974 876 aaKnown RBP12.64□□□□□ -0.39
PHGDH-231ENST00000641939 C12orf73Q69YU5 71 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 FAHD2BQ6P2I3 314 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-231ENST00000641939 C1orf87Q8N0U7 546 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 MUC20Q8N307 709 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-231ENST00000641939 TCEANCQ8N8B7 351 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 FAHD2AQ96GK7 314 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 PGAM5Q96HS1 289 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 MDFIQ99750 246 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 NIPAL2Q9H841 368 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 PATZ1Q9HBE1 687 aaKnown RBP12.64□□□□□ -0.39
PHGDH-231ENST00000641939 BRD7Q9NPI1 651 aa12.64□□□□□ -0.39
PHGDH-231ENST00000641939 A0A0G2JMP0 313 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 A0A0X1KG70 313 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 SAC3D1A6NKF1 404 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 FOXH1O75593 365 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 PNPP00491 289 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 MRPL3P09001 348 aaKnown RBP12.63□□□□□ -0.39
PHGDH-231ENST00000641939 IRF2P14316 349 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 PMELP40967 661 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 HCCSP53701 268 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 EFNB1P98172 346 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 GFOD2Q3B7J2 385 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 PRAMEF6Q5VXH4 476 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 ZFP1Q6P2D0 407 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 LRRN1Q6UXK5 716 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 MEPCEQ7L2J0 689 aaKnown RBP12.63□□□□□ -0.39
PHGDH-231ENST00000641939 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 KLBQ86Z14 1044 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 SPERTQ8NA61 448 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 PLPP7Q8NBV4 271 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 OR4M2Q8NGB6 313 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 OR11L1Q8NGX0 322 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 TMEM163Q8TC26 289 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 Q8TCH9 128 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 OSBPL10Q9BXB5 764 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 RGCCQ9H4X1 137 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 UFSP2Q9NUQ7 469 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 H2AFY2Q9P0M6 372 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-231ENST00000641939 ZNF319Q9P2F9 582 aa12.63□□□□□ -0.39
PHGDH-231ENST00000641939 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-231ENST00000641939 hCG_38984A0A1B0GV85 526 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 SLC22A31A6NKX4 558 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 F5H0A9 414 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-231ENST00000641939 ZNF205O95201 554 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 FSTL3O95633 263 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 PTBP3O95758 552 aaKnown RBP12.62□□□□□ -0.39
PHGDH-231ENST00000641939 GSK3AP49840 483 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 PSMA6P60900 246 aaKnown RBP12.62□□□□□ -0.39
PHGDH-231ENST00000641939 LCN2P80188 198 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 MZT1Q08AG7 82 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 MPPED2Q15777 294 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 AADACL4Q5VUY2 407 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 NXNL2Q5VZ03 156 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 KCTD18Q6PI47 426 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-231ENST00000641939 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
PHGDH-231ENST00000641939 C10orf67Q8IYJ2 551 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 ASB17Q8WXJ9 295 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 DVL3Q92997 716 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-231ENST00000641939 IL4I1Q96RQ9 567 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 CNN2Q99439 309 aaKnown RBP12.62□□□□□ -0.39
PHGDH-231ENST00000641939 PKP2Q99959 881 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 RBM4BQ9BQ04 359 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms