RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 DOLPP1Q86YN1 238 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 ZNF433Q8N7K0 673 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-221ENST00000641573 ST6GALNAC3Q8NDV1 305 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 CPEB3Q8NE35 698 aaKnown RBP11.4□□□□□ -0.58
PHGDH-221ENST00000641573 NANOS1Q8WY41 292 aaKnown RBP11.4□□□□□ -0.58
PHGDH-221ENST00000641573 FGGYQ96C11 551 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
PHGDH-221ENST00000641573 OR10A2Q9H208 303 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 MIXL1Q9H2W2 232 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 SP140LQ9H930 580 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 NOX3Q9HBY0 568 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 ABCB9Q9NP78 766 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 ZNF275Q9NSD4 429 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-221ENST00000641573 TAS2R4Q9NYW5 299 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 COMMD3Q9UBI1 195 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 CKLFQ9UBR5 152 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 ATPIF1Q9UII2 106 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 FOXJ3Q9UPW0 622 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 OSGIN2Q9Y236 505 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 V9GY05 133 aa11.4□□□□□ -0.58
PHGDH-221ENST00000641573 A0A0U1RQV5 110 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 CIB4A0PJX0 185 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 J3QRK9 145 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 RAD51DO75771 328 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 LYZL6O75951 148 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 IGLV3-1P01715 115 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 LCATP04180 440 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 MAS1P04201 325 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 COX5BP10606 129 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 IGFBP3P17936 291 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-221ENST00000641573 ATF1P18846 271 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 FSTP19883 344 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 CEACAM8P31997 349 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-221ENST00000641573 HGFACQ04756 655 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 PLP2Q04941 152 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 RBPJQ06330 500 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 DCTN2Q13561 401 aaKnown RBP11.39□□□□□ -0.59
PHGDH-221ENST00000641573 GABRA6Q16445 453 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 DDI2Q5TDH0 399 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 ASPHD2Q6ICH7 369 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 CCDC190Q86UF4 302 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 LAX1Q8IWV1 398 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF610Q8N9Z0 462 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 NAXEQ8NCW5 288 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 OR52H1Q8NGJ2 320 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 OR1J2Q8NGS2 313 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 BORCS5Q969J3 196 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 POM121Q96HA1 1249 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 FAM71F1Q96KD3 344 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-221ENST00000641573 LYZL4Q96KX0 146 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 WDFY2Q96P53 400 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 SLC30A2Q9BRI3 323 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 SOX7Q9BT81 388 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 OPN3Q9H1Y3 402 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-221ENST00000641573 B3GNT2Q9NY97 397 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF835Q9Y2P0 537 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 CACNA1CQ13936 2221 aa11.39□□□□□ -0.59
PHGDH-221ENST00000641573 MED12LQ86YW9 2145 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 ARHGAP21Q5T5U3 1957 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 ANXA2P2A6NMY6 339 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 IFITM5A6NNB3 132 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 HPGDSO60760 199 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 SLC19A2O60779 497 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 EDN3P14138 238 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF12P17014 697 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF20P17024 532 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 COX5AP20674 150 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 ETV6P41212 452 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 PSMD7P51665 324 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 PPP3R1P63098 170 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 GSG1Q2KHT4 349 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 SNAI3Q3KNW1 292 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 HES5Q5TA89 166 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 MDP1Q86V88 176 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 CCDC36Q8IYA8 594 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 GABRG1Q8N1C3 465 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 PARP16Q8N5Y8 322 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 PLPP7Q8NBV4 271 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 DNAAF1Q8NEP3 725 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 OR14K1Q8NGZ2 314 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 SGK3Q96BR1 496 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 ADAT3Q96EY9 351 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-221ENST00000641573 ABRACLQ9P1F3 81 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 PCNX1Q96RV3 2341 aa11.38□□□□□ -0.59
PHGDH-221ENST00000641573 MED13LQ71F56 2210 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 NCOA6Q14686 2063 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-221ENST00000641573 LOC100509620A0A075B734 347 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 A0A1B0GUH1 482 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 AIPO00170 330 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-221ENST00000641573 STOMP27105 288 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 GNALP38405 381 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 DDOSTP39656 456 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 UBE2NP61088 152 aaKnown RBP11.37□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF45Q02386 682 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 TSC22D1Q15714 1073 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 SPANXN2Q5MJ10 180 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 BEND4Q6ZU67 534 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 CXorf67Q86X51 503 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-221ENST00000641573 SERPINA12Q8IW75 414 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms