RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	DPAGT1	Q9H3H5	408 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	TMPRSS5	Q9H3S3	457 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	MTHFD2L	Q9H903	347 aa	Predicted RBP	5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	PDP1	Q9P0J1	537 aa	Predicted RBP	5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	IL36RN	Q9UBH0	155 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	P2RX2	Q9UBL9	471 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	FOXJ3	Q9UPW0	622 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	B3GALT5	Q9Y2C3	310 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	ABCA1	O95477	2261 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	FREM1	Q5H8C1	2179 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523		A0A096LPI6	279 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	FAM240B	A0A1B0GVZ2	78 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523		A0A1W2PP18	115 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	PRSS46	E5RG02	174 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	HMGN4	O00479	90 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	SDHD	O14521	159 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	KLF11	O14901	512 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	CLOCK	O15516	846 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	NDUFS7	O75251	213 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	MRPL33	O75394	65 aa	Known RBP	5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	ANP32D	O95626	131 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	OR2T7	P0C7T2	308 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	COX5A	P20674	150 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	BDKRB2	P30411	391 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	CRISP3	P54108	245 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	SST	P61278	116 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	SLC35A1	P78382	337 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	IRX1	P78414	480 aa	Predicted RBP	5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	MAB21L1	Q13394	359 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	KLF9	Q13886	244 aa	Predicted RBP	5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	PXDC1	Q5TGL8	231 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	FBXW9	Q5XUX1	488 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	ASPHD2	Q6ICH7	369 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	ZNF621	Q6ZSS3	439 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	RNF130	Q86XS8	419 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	C17orf78	Q8N4C9	275 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	PNPT1	Q8TCS8	783 aa	Known RBP	5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	TSEN15	Q8WW01	171 aa	Known RBP	5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	RAB8B	Q92930	207 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	SLC35B4	Q969S0	331 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	ITCH	Q96J02	903 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	CDH20	Q9HBT6	801 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	TREM1	Q9NP99	234 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	TAS2R16	Q9NYV7	291 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	TMEM181	Q9P2C4	612 aa		5.38	□□□□□ -1.55
CASC19-238	ENST00000641523	HEATR5A	Q86XA9	2040 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	VPS13C	Q709C8	3753 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	TMED7-TICAM2	A0A0A6YYA0	188 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	IGHV3-15	A0A0B4J1V0	119 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	IGHV4-28	A0A0C4DH34	117 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	CIB4	A0PJX0	185 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	OR6C65	A6NJZ3	312 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	OR5H1	A6NKK0	313 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	CCT8L1P	A6NM43	557 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	UBD	O15205	165 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	RNF13	O43567	381 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	SPRY3	O43610	288 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	VAMP5	O95183	116 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	GPI	P06744	558 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	PNMT	P11086	282 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	B4GALT1	P15291	398 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	PTGFR	P43088	359 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	IDH2	P48735	452 aa	Known RBP	5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	FUT5	Q11128	374 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	MAPK14	Q16539	360 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	AANAT	Q16613	207 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	NRF1	Q16656	503 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	ZNF672	Q499Z4	452 aa	Predicted RBP	5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	KCTD18	Q6PI47	426 aa	Predicted RBP	5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	PAQR6	Q6TCH4	344 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	COLCA1	Q6ZS62	124 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	CLEC4F	Q8N1N0	589 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	OR2AK2	Q8NG84	335 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	SMAP2	Q8WU79	429 aa	Predicted RBP	5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	CHPT1	Q8WUD6	406 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	GGH	Q92820	318 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	GFI1	Q99684	422 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	KLHDC3	Q9BQ90	382 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	SF3B5	Q9BWJ5	86 aa	Known RBP	5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	C20orf27	Q9GZN8	174 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	SLC38A1	Q9H2H9	487 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	NOX4	Q9NPH5	578 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	CTPS2	Q9NRF8	586 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	SDR39U1	Q9NRG7	319 aa	Predicted RBP	5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	GPR173	Q9NS66	373 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	TMED7	Q9Y3B3	224 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	GRIP1	Q9Y3R0	1128 aa		5.37	□□□□□ -1.55
CASC19-238	ENST00000641523	GOLGA8Q	A0A0J9YX86	632 aa		5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	hDV102S1	A0JD36	115 aa		5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	VGLL3	A8MV65	326 aa		5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	INAFM1	C9JVW0	142 aa		5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	ABCD4	O14678	606 aa		5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	TNFRSF13B	O14836	293 aa	Predicted RBP	5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	SPINT2	O43291	252 aa		5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	LYZL6	O75951	148 aa		5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	RPS4Y1	P22090	263 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	PPIB	P23284	216 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	CXCR1	P25024	350 aa		5.36	□□□□□ -1.55
CASC19-238	ENST00000641523	LMO1	P25800	156 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms