RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 C18orf65Q6ZTR6 163 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 HDXQ7Z353 690 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 LHFPL4Q7Z7J7 247 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 NAA40Q86UY6 237 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 C11orf42Q8N5U0 333 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 LRRC75AQ8NAA5 344 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 GPR32P1Q8NGA4 272 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 OR1F12Q8NHA8 337 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 ADAMTS16Q8TE57 1224 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 LIPHQ8WWY8 451 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 APOBEC3DQ96AK3 386 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-226ENST00000640916 RBP7Q96R05 134 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 P2RX4Q99571 388 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 MCRIP2Q9BUT9 160 aaKnown RBP6.46□□□□□ -1.38
SCARB2-226ENST00000640916 PAIP1Q9H074 479 aaKnown RBP6.46□□□□□ -1.38
SCARB2-226ENST00000640916 MYLK2Q9H1R3 596 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 RAD21L1Q9H4I0 556 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 KCNK9Q9NPC2 374 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 ZIM2Q9NZV7 527 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 STX18Q9P2W9 335 aaKnown RBP6.46□□□□□ -1.38
SCARB2-226ENST00000640916 SLC7A7Q9UM01 511 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 NDUFAF1Q9Y375 327 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 TMEM247A6NEH6 219 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 CLIC1O00299 241 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 RER1O15258 196 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 CLIC3O95833 236 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 MT-ND1P03886 318 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 TFF1P04155 84 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 RAB6AP20340 208 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 RPL27P61353 136 aaKnown RBP6.45□□□□□ -1.38
SCARB2-226ENST00000640916 FADDQ13158 208 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 IKZF1Q13422 519 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 FHL1Q13642 323 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 DUSP7Q16829 419 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 PLA1AQ53H76 456 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-226ENST00000640916 REEP3Q6NUK4 255 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 UNQ9370/PRO34162Q6UXP9 181 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 CENPVQ7Z7K6 275 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-226ENST00000640916 WDR86Q86TI4 376 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 MSRB3Q8IXL7 192 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 PFN4Q8NHR9 129 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 ACOT11Q8WXI4 607 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-226ENST00000640916 DUS3LQ96G46 650 aaKnown RBP6.45□□□□□ -1.38
SCARB2-226ENST00000640916 LYZL4Q96KX0 146 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 SORT1Q99523 831 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 GRPEL1Q9HAV7 217 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 SLC25A37Q9NYZ2 338 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 ATPIF1Q9UII2 106 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 SCOCQ9UIL1 159 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 ADAM30Q9UKF2 790 aa6.45□□□□□ -1.38
SCARB2-226ENST00000640916 KMT2AQ03164 3969 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 DNAH10Q8IVF4 4471 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 SORL1Q92673 2214 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 C5orf58C9J3I9 102 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 F2RL2O00254 374 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 NDUFB3O43676 98 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 IL6P05231 212 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 GRPP07492 148 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 BPGMP07738 259 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 MUC1P15941 1255 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-226ENST00000640916 JUNBP17275 347 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-226ENST00000640916 LUMP51884 338 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-226ENST00000640916 ERVFRD-1P60508 538 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 HIST1H3AP68431 136 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 CDK6Q00534 326 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 TOP3AQ13472 1001 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-226ENST00000640916 AQP6Q13520 282 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 OR8G1Q15617 311 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 DGUOKQ16854 277 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 RABL3Q5HYI8 236 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 HIST2H3PS2Q5TEC6 136 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 HIST2H3AQ71DI3 136 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 MKXQ8IYA7 352 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 SMYD1Q8NB12 490 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 OR5T2Q8NGG2 359 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 FNDC8Q8TC99 324 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 H1FXQ92522 213 aaKnown RBP6.44□□□□□ -1.38
SCARB2-226ENST00000640916 GTF2H4Q92759 462 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 APOPT1Q96IL0 206 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 MPP4Q96JB8 637 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 HCAR1Q9BXC0 346 aa6.44□□□□□ -1.38
SCARB2-226ENST00000640916 ZMAT5Q9UDW3 170 aaKnown RBP6.44□□□□□ -1.38
SCARB2-226ENST00000640916 TRAPPC13A5PLN9 417 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 PRORSD1PA6NEY8 169 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 CD300LBA8K4G0 201 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 H7C1C5 153 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 SDHDO14521 159 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 GMDSO60547 372 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 ANP32DO95626 131 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 ACSM4P0C7M7 580 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 NR2C1P13056 603 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 CTLA4P16410 223 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 AQP1P29972 269 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 GUCA1AP43080 201 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-226ENST00000640916 VEGFCP49767 419 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 LCN6P62502 163 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 MICBQ29980 383 aa6.43□□□□□ -1.38
SCARB2-226ENST00000640916 GCNT6Q5T4J0 391 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms