RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 SPRY3O43610 288 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 IGHV1-46P01743 117 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 MAGEB1P43366 347 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 ZNF81P51508 661 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 ART1P52961 327 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 NANOS3P60323 173 aaKnown RBP11.25□□□□□ -0.61
GTF3A-209ENST00000640289 TNK1Q13470 666 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 WDR38Q5JTN6 314 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 BCL2L15Q5TBC7 163 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 OR2G6Q5TZ20 316 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 KCTD20Q7Z5Y7 419 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 ELMOD2Q8IZ81 293 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 LRRC75A-AS1Q8N1F1 130 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 SYS1Q8N2H4 156 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 PRSS35Q8N3Z0 413 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 OR8G5Q8NG78 346 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 OR56B2PQ8NGI1 322 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 OR51E1Q8TCB6 317 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 SPRYD4Q8WW59 207 aaPredicted RBP11.25□□□□□ -0.61
GTF3A-209ENST00000640289 RAB1BQ9H0U4 201 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 MS4A5Q9H3V2 200 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 Q9H521 79 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 MOB1AQ9H8S9 216 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 GPR160Q9UJ42 338 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 EXOSC1Q9Y3B2 195 aaKnown RBP11.25□□□□□ -0.61
GTF3A-209ENST00000640289 DSCAMO60469 2012 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 E9PI62 339 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 H0YL77 283 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 H3BSH0 61 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 P2RY10O00398 339 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 NCR1O76036 304 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 IGLV3-1P01715 115 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 HTR1AP08908 422 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 TACSTD2P09758 323 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 CCDC159P0C7I6 412 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 SELEP16581 610 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 MYL12AP19105 171 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 KIR3DL2P43630 455 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 GSK3AP49840 483 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 CSNK2BP67870 215 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 CCL8P80075 99 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 TSTQ16762 297 aaKnown RBP11.24□□□□□ -0.61
GTF3A-209ENST00000640289 SPRNQ5BIV9 151 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 COMMD2Q86X83 199 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 KRTAP1-3Q8IUG1 177 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 ZNF786Q8N393 782 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 DVL3Q92997 716 aaPredicted RBP11.24□□□□□ -0.61
GTF3A-209ENST00000640289 MRPL48Q96GC5 212 aaKnown RBP11.24□□□□□ -0.61
GTF3A-209ENST00000640289 FAM71F1Q96KD3 344 aaPredicted RBP11.24□□□□□ -0.61
GTF3A-209ENST00000640289 FOXC2Q99958 501 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 RGCCQ9H4X1 137 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 OPA3Q9H6K4 179 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 GPR84Q9NQS5 396 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 CYSLTR2Q9NS75 346 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 SCN3BQ9NY72 215 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 ERVK-18Q9QC07 812 aa11.24□□□□□ -0.61
GTF3A-209ENST00000640289 FBXO9Q9UK97 447 aaPredicted RBP11.24□□□□□ -0.61
GTF3A-209ENST00000640289 AKAP6Q13023 2319 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 PLCE1Q9P212 2302 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 A0A0U1RQV5 110 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 A0A1B0GTI1 187 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 MLNRO43193 412 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 SSX4O60224 188 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
GTF3A-209ENST00000640289 HPXP02790 462 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 MT-ND5P03915 603 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 HLA-DPB1P04440 258 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 CDK1P06493 297 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 CRHBPP24387 322 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 ACKR3P25106 362 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 LIPAP38571 399 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 GTF2A1P52655 376 aaPredicted RBP11.23□□□□□ -0.61
GTF3A-209ENST00000640289 EFNA4P52798 201 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 SLC35A2P78381 396 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 DOC2BQ14184 412 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 OR8B8Q15620 311 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 Q5PR19 223 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 XAF1Q6GPH4 301 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 KLBQ86Z14 1044 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 RDH10Q8IZV5 341 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 KLHL36Q8N4N3 616 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 OR10AD1Q8NGE0 317 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 OR2G2Q8NGZ5 317 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 SLC30A2Q9BRI3 323 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 CXXC4Q9H2H0 198 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 PPP1R3EQ9H7J1 279 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 CHCHD3Q9NX63 227 aaKnown RBP11.23□□□□□ -0.61
GTF3A-209ENST00000640289 FRRS1LQ9P0K9 344 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 CGGBP1Q9UFW8 167 aaPredicted RBP11.23□□□□□ -0.61
GTF3A-209ENST00000640289 CAB39Q9Y376 341 aaPredicted RBP11.23□□□□□ -0.61
GTF3A-209ENST00000640289 TPRKBQ9Y3C4 175 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 CENPEQ02224 2701 aa11.23□□□□□ -0.61
GTF3A-209ENST00000640289 PDZD2O15018 2839 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 LYNX1G3V0Z9 82 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 POLQO75417 2590 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 LALBAP00709 142 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 MT-ND2P03891 347 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 LYNX1P0DP58 116 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms