RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TEX37Q96LM6 180 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 POMKQ9H5K3 350 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 ARL15Q9NXU5 204 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 LRP12Q9Y561 859 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 UNC119BA6NIH7 251 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 GADD45AP24522 165 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 SPANXN3Q5MJ09 141 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 TNFAIP8L2Q6P589 184 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-209ENST00000639244 TBPL2Q6SJ96 375 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 IGDCC3Q8IVU1 814 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 OR4D11Q8NGI4 311 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 OR5D16Q8NGK9 328 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 OR10G4Q8NGN3 311 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 OR2T27Q8NH04 317 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 SLC7A10Q9NS82 523 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 IL17CQ9P0M4 197 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 SLC17A4Q9Y2C5 497 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 COA3Q9Y2R0 106 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-209ENST00000639244 YIPF1Q9Y548 306 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 TRAV19A0A0A6YYK7 116 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF816-ZNF321PA0A0X1KG74 233 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 SHISA8B8ZZ34 492 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 IRF1P10914 325 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 EGR4Q05215 589 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 DLX2Q07687 328 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-209ENST00000639244 NFATC4Q14934 902 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.88□□□□□ -1.79
SCN3A-209ENST00000639244 LRRC55Q6ZSA7 311 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 OR2G3Q8NGZ4 309 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF75AQ96N20 296 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 GPR20Q99678 358 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 DOHHQ9BU89 302 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 CDCA4Q9BXL8 241 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 ACKR4Q9NPB9 350 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 VAX2Q9UIW0 290 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 CPS1P31327 1500 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 PHLPP1O60346 1717 aa3.88□□□□□ -1.79
SCN3A-209ENST00000639244 NPIPB13A6NJU9 1138 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 NPIPB4C9JG80 1138 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 J3QR06 171 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 VENTXO95231 258 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 MPIG6BO95866 241 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 WNT2P09544 360 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 TPT1P13693 172 aaKnown RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 MAOAP21397 527 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ART1P52961 327 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 IER5Q5VY09 327 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 DHRS11Q6UWP2 260 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 Q6ZN92 141 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SERPINA11Q86U17 422 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 UPRTQ96BW1 309 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 PITX2Q99697 317 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 DUSP16Q9BY84 665 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 TMEM126AQ9H061 195 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ATG5Q9H1Y0 275 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 FRRS1LQ9P0K9 344 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ARHGEF17Q96PE2 2063 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ARFGEF3Q5TH69 2177 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ADGRB2O60241 1585 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 HLA-AP01891 365 aaKnown RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CRYGBP07316 175 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SSTR1P30872 391 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CAMPP49913 170 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SRSF1Q07955 248 aaKnown RBP eCLIP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 HSD52Q0P140 79 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CCSMST1Q4G0I0 132 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ABHD4Q8TB40 342 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF418Q8TF45 676 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 KCTD12Q96CX2 325 aaKnown RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 KCNK15Q9H427 330 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SPANXB1Q9NS25 103 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 FKBP11Q9NYL4 201 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SIPA1L3O60292 1781 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 BORCS7-ASMTA0A0B4J1R7 106 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 J3KT08 172 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 P2RX6O15547 441 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CDRT1O95170 752 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CELA3AP09093 270 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ACP2P11117 423 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ECI1P42126 302 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 MFGE8Q08431 387 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 TMEM132DQ14C87 1099 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ANKRD55Q3KP44 614 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CD300EQ496F6 205 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 MSS51Q4VC12 460 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ASPHD2Q6ICH7 369 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SLC5A8Q8N695 610 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 P2RY11Q96G91 374 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 LRRC3BQ96PB8 259 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SLC17A5Q9NRA2 495 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SPTBN1Q01082 2364 aaKnown RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF850A8MQ14 1090 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 UPK1AO00322 258 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ABHD18Q0P651 414 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 EIF2B1Q14232 305 aaKnown RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 OR8B8Q15620 311 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 PRSS8Q16651 343 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 OR52L1Q8NGH7 329 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 OR2D2Q9H210 308 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 DLL4Q9NR61 685 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms