RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ZNF879B4DU55 563 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 TNFRSF13BO14836 293 aaPredicted RBP13.98□□□□□ -0.17
SMN2-216ENST00000638794 ADAM20O43506 726 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 GYPBP06028 91 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 SPARCP09486 303 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 SLC2A1P11166 492 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 MMP9P14780 707 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 HMGA2P52926 109 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 ZNF770Q6IQ21 691 aaPredicted RBP13.98□□□□□ -0.17
SMN2-216ENST00000638794 ZNF826PQ6ZT77 177 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 LNX2Q8N448 690 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 OR56B2PQ8NGI1 322 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 OR4C15Q8NGM1 316 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 TBX15Q96SF7 602 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 NOX4Q9NPH5 578 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 TBC1D23Q9NUY8 699 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 C1orf123Q9NWV4 160 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 N6AMT1Q9Y5N5 214 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 MMP24Q9Y5R2 645 aa13.98□□□□□ -0.17
SMN2-216ENST00000638794 TRAV38-1A0A0B4J264 116 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 A6NLC8 198 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 TNFRSF11BO00300 401 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 P2RY10O00398 339 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 FCN3O75636 299 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 TOX4O94842 621 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 GASTP01350 101 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 GYPAP02724 150 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 LIPFP07098 398 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 GRPP07492 148 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 ENTPD1P49961 510 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 CRMP1Q14194 572 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 TAF13Q15543 124 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 PCK2Q16822 640 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 FIP1L1Q6UN15 594 aaKnown RBP13.97□□□□□ -0.17
SMN2-216ENST00000638794 CYP2R1Q6VVX0 501 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 Q6YL49 198 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 RASSF6Q6ZTQ3 369 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 FAM90A1Q86YD7 464 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 DEFB107AQ8IZN7 70 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 GCSAMQ8N6F7 178 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 SPERTQ8NA61 448 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 ZNF511Q8NB15 262 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 SLAMF6Q96DU3 332 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 KCNJ15Q99712 375 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 CHIAQ9BZP6 476 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 TRIM15Q9C019 465 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 RASSF4Q9H2L5 321 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 TRIM36Q9NQ86 728 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 CENPMQ9NSP4 180 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 ARL8BQ9NVJ2 186 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 KIF17Q9P2E2 1029 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 TAGLN3Q9UI15 199 aa13.97□□□□□ -0.17
SMN2-216ENST00000638794 CENPVL3A0A0U1RRI6 287 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 hCG_1807616A0A1W2PRN6 198 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 ZNF593O00488 134 aaPredicted RBP13.96□□□□□ -0.17
SMN2-216ENST00000638794 NDUFA2O43678 99 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 MELTFP08582 738 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 ATP6V1B2P21281 511 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 FMO3P31513 532 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 PPP1R8Q12972 351 aaKnown RBP13.96□□□□□ -0.17
SMN2-216ENST00000638794 CPLX4Q7Z7G2 160 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 LINC00471Q8N535 108 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 PNLDC1Q8NA58 520 aaKnown RBP13.96□□□□□ -0.17
SMN2-216ENST00000638794 OR4Q3Q8NH05 313 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 WDFY2Q96P53 400 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 TSSK6Q9BXA6 273 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 NMNAT2Q9BZQ4 307 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 OPA3Q9H6K4 179 aa13.96□□□□□ -0.17
SMN2-216ENST00000638794 IGHV3OR15-7A0A075B7D8 119 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.95□□□□□ -0.18
SMN2-216ENST00000638794 ZNF878C9JN71 531 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 XRCC2O43543 280 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 CCNB2O95067 398 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 LHBP01229 141 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 CLUP10909 449 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 SPI1P17947 270 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 MAGEA2P43356 314 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 RAG2P55895 527 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 RELBQ01201 579 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 SRSF4Q08170 494 aaKnown RBP13.95□□□□□ -0.18
SMN2-216ENST00000638794 POU4F2Q12837 409 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 TEX30Q5JUR7 227 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 METTL11BQ5VVY1 283 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 C16orf89Q6UX73 402 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 BTN2A1Q7KYR7 527 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 TMEM86BQ8N661 226 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 KIR3DL3Q8N743 410 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 AQP11Q8NBQ7 271 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 OR6K6Q8NGW6 343 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 OR4F5Q8NH21 305 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 WFDC12Q8WWY7 111 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 GATAD2BQ8WXI9 593 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 SPSB4Q96A44 273 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 FAM71F1Q96KD3 344 aaPredicted RBP13.95□□□□□ -0.18
SMN2-216ENST00000638794 SIRPDQ9H106 197 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 C14orf119Q9NWQ9 140 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 C1RLQ9NZP8 487 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 VWFP04275 2813 aa13.95□□□□□ -0.18
SMN2-216ENST00000638794 WNK1Q9H4A3 2382 aa13.94□□□□□ -0.18
SMN2-216ENST00000638794 A0A1B0GUS0 222 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms