RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 OR2G2Q8NGZ5 317 aa16.6■□□□□ 0.25
HLA-A-209ENST00000638375 GATAD2BQ8WXI9 593 aa16.6■□□□□ 0.25
HLA-A-209ENST00000638375 GTF3AQ92664 365 aaKnown RBP16.6■□□□□ 0.25
HLA-A-209ENST00000638375 YTHDF1Q9BYJ9 559 aaKnown RBP16.6■□□□□ 0.25
HLA-A-209ENST00000638375 RGCCQ9H4X1 137 aa16.6■□□□□ 0.25
HLA-A-209ENST00000638375 LRCH1Q9Y2L9 728 aa16.6■□□□□ 0.25
HLA-A-209ENST00000638375 ABCA12Q86UK0 2595 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 DSCAMO60469 2012 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 hCG_38984A0A1B0GV85 526 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 MYL12BO14950 172 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 LALBAP00709 142 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 RAF1P04049 648 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 EEF1B2P24534 225 aaKnown RBP16.59■□□□□ 0.25
HLA-A-209ENST00000638375 GTF2A1P52655 376 aaPredicted RBP16.59■□□□□ 0.25
HLA-A-209ENST00000638375 GBX2P52951 348 aaPredicted RBP16.59■□□□□ 0.25
HLA-A-209ENST00000638375 SNRPD2P62316 118 aaKnown RBP16.59■□□□□ 0.25
HLA-A-209ENST00000638375 OR5AS1Q8N127 324 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 OR51E1Q8TCB6 317 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 CACNG6Q9BXT2 260 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 OPA3Q9H6K4 179 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 FRRS1LQ9P0K9 344 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 ERGIC3Q9Y282 383 aa16.59■□□□□ 0.25
HLA-A-209ENST00000638375 IQCF6A8MYZ5 107 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 M0R233 179 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 OVOL3O00110 214 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 TIMM8AO60220 97 aaPredicted RBP16.58■□□□□ 0.24
HLA-A-209ENST00000638375 LILRA1O75019 489 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 CDKN1AP38936 164 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 TGM4P49221 684 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 MMP15P51511 669 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 MRPL28Q13084 256 aaKnown RBP16.58■□□□□ 0.24
HLA-A-209ENST00000638375 TNK1Q13470 666 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 ALKBH1Q13686 389 aaKnown RBP16.58■□□□□ 0.24
HLA-A-209ENST00000638375 NKPD1Q17RQ9 610 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 ODF4Q2M2E3 257 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 OR56B2PQ8NGI1 322 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 CCDC90BQ9GZT6 254 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 GPR84Q9NQS5 396 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 BABAM2Q9NXR7 383 aa16.58■□□□□ 0.24
HLA-A-209ENST00000638375 LSM2Q9Y333 95 aaKnown RBP16.58■□□□□ 0.24
HLA-A-209ENST00000638375 APCP25054 2843 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 FLNBO75369 2602 aaKnown RBP16.57■□□□□ 0.24
HLA-A-209ENST00000638375 SPG11Q96JI7 2443 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 A0A1B0GTI1 187 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 GGT3PA6NGU5 568 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 OR4C45A6NMZ5 311 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 CD300LBA8K4G0 201 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 P2RY10O00398 339 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 NAT2P11245 290 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 SELEP16581 610 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 CFL1P23528 166 aaKnown RBP16.57■□□□□ 0.24
HLA-A-209ENST00000638375 GSK3AP49840 483 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 CCR9P51686 369 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 WNT4P56705 351 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 OR8B8Q15620 311 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 Q6ZR03 302 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 ZCCHC24Q8N2G6 241 aaKnown RBP16.57■□□□□ 0.24
HLA-A-209ENST00000638375 BHLHE23Q8NDY6 225 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 PIGTQ969N2 578 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 OR5M11Q96RB7 305 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 MND1Q9BWT6 205 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 DYNLRB1Q9NP97 96 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 ZNF391Q9UJN7 358 aa16.57■□□□□ 0.24
HLA-A-209ENST00000638375 SIRT4Q9Y6E7 314 aaPredicted RBP16.57■□□□□ 0.24
HLA-A-209ENST00000638375 TRIM64A6NGJ6 449 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 ZSCAN5BA6NJL1 495 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 CCL1P22362 96 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 ACKR3P25106 362 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 MAP2K4P45985 399 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 PPOXP50336 477 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 CDH15P55291 814 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 CDK5R1Q15078 307 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 MOGQ16653 247 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 COMMD2Q86X83 199 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 RDH10Q8IZV5 341 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 OR8G5Q8NG78 346 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 RPS4Y2Q8TD47 263 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 HAVCR2Q8TDQ0 301 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 FAM71F1Q96KD3 344 aaPredicted RBP16.56■□□□□ 0.24
HLA-A-209ENST00000638375 MSL2Q9HCI7 577 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 TRIM36Q9NQ86 728 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 LRBAP50851 2863 aa16.56■□□□□ 0.24
HLA-A-209ENST00000638375 ARFGEF3Q5TH69 2177 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 LOC107986453A0A1B0GWG9 222 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 H3BSH0 61 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 H7C417 338 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 DNASE1P24855 282 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 CHN2P52757 468 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 KCTD21Q4G0X4 260 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 CCDC58Q4VC31 144 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 RPL22L1Q6P5R6 122 aaKnown RBP16.55■□□□□ 0.24
HLA-A-209ENST00000638375 Q6ZSR3 168 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 CDH24Q86UP0 819 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 ZFP41Q8N8Y5 198 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 PLPP7Q8NBV4 271 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 TPK1Q9H3S4 243 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 CXorf56Q9H5V9 222 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 CGGBP1Q9UFW8 167 aaPredicted RBP16.55■□□□□ 0.24
HLA-A-209ENST00000638375 PMF1-BGLAPU3KQ54 211 aa16.55■□□□□ 0.24
HLA-A-209ENST00000638375 LOC390937A0A1W2PQ73 354 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms