RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 NXPE3Q969Y0 559 aa13.79□□□□□ -0.2
UBE3A-227ENST00000638011 OR5G3P0C626 314 aa13.79□□□□□ -0.2
UBE3A-227ENST00000638011 TUSC1Q2TAM9 212 aa13.79□□□□□ -0.2
UBE3A-227ENST00000638011 EMCNQ9ULC0 261 aa13.79□□□□□ -0.2
UBE3A-227ENST00000638011 MRPS16Q9Y3D3 137 aaKnown RBP13.79□□□□□ -0.2
UBE3A-227ENST00000638011 SERINC4A6NH21 518 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 CFHP08603 1231 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 AQP6Q13520 282 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 CST6Q15828 149 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 OR2W3Q7Z3T1 314 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 FREM1Q5H8C1 2179 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 OR2T8A6NH00 312 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 C6orf132Q5T0Z8 1188 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 SEZ6L2Q6UXD5 910 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 TMEM64Q6YI46 380 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 WDFY2Q96P53 400 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 PARP12Q9H0J9 701 aaKnown RBP13.78□□□□□ -0.2
UBE3A-227ENST00000638011 MED12LQ86YW9 2145 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 CD46P15529 392 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
UBE3A-227ENST00000638011 HES1Q14469 280 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 OR1C1Q15619 314 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 LILRA2Q8N149 483 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 GLIS2Q9BZE0 524 aaPredicted RBP13.78□□□□□ -0.2
UBE3A-227ENST00000638011 SRSF9Q13242 221 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBE3A-227ENST00000638011 OR1L1Q8NH94 360 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 ZFP30Q9Y2G7 519 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 ZNF98A6NK75 572 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 C21orf62-AS1Q17RA5 79 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 AFMIDQ63HM1 303 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 NPWQ8N729 165 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 NAT6Q93015 286 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
UBE3A-227ENST00000638011 ITGB4P16144 1822 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 ZNF583Q96ND8 569 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 CYSLTR2Q9NS75 346 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 PAFAH1B2P68402 229 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 ARG2P78540 354 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 TMEM268Q5VZI3 342 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 LEMD1Q68G75 181 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 RNF2Q99496 336 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 MED20Q9H944 212 aa13.78□□□□□ -0.2
UBE3A-227ENST00000638011 GAGE10A6NGK3 116 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 NID1P14543 1247 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 SLC6A1P30531 599 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 BRS3P32247 399 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 RAD52P43351 418 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 FOXA1P55317 472 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 YOD1Q5VVQ6 348 aaPredicted RBP13.77□□□□□ -0.2
UBE3A-227ENST00000638011 Q8IYB0 196 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 WASHC3Q9Y3C0 194 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 PMCHL1Q16048 86 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 IGFBP7Q16270 282 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 OR8D4Q8NGM9 314 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 KCND3Q9UK17 655 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 ACOT8O14734 319 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 RHBDL1O75783 438 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 F13BP05160 661 aa13.77□□□□□ -0.2
UBE3A-227ENST00000638011 KCNAB3O43448 404 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 FRS3O43559 492 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 ASCL1P50553 236 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 POM121Q96HA1 1249 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 SFXN1Q9H9B4 322 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 ZMAT3Q9HA38 289 aaKnown RBP13.77□□□□□ -0.21
UBE3A-227ENST00000638011 A0A1W2PNV4 684 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 ERVFRD-1P60508 538 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 CCDC190Q86UF4 302 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 VRK2Q86Y07 508 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 GALMQ96C23 342 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 LINC00597Q9H2U6 94 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 CMC2Q9NRP2 79 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 DYSFO75923 2080 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 CORTO00230 105 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 GFRA2O00451 464 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 FPR2P25090 351 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 CSNK1DP48730 415 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 SMIM21Q3B7S5 101 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 OR4B1Q8NGF8 309 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 PP6455Q8WZ26 134 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 GMPPAQ96IJ6 420 aaPredicted RBP13.77□□□□□ -0.21
UBE3A-227ENST00000638011 CDC42EP3Q9UKI2 254 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 CACNA1HO95180 2353 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 ARAP2Q8WZ64 1704 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 H3BVH4 76 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 ABLIM3O94929 683 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 APOBEC1P41238 236 aaKnown RBP13.77□□□□□ -0.21
UBE3A-227ENST00000638011 SNX22Q96L94 193 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 UBE2ZQ9H832 354 aaPredicted RBP13.77□□□□□ -0.21
UBE3A-227ENST00000638011 IL21Q9HBE4 155 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 SLCO3A1Q9UIG8 710 aa13.77□□□□□ -0.21
UBE3A-227ENST00000638011 UBE2L5PA0A1B0GUS4 154 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 NPY5RQ15761 445 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 TMEM251Q8N6I4 163 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 DEFB118Q96PH6 123 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 TNFRSF10CO14798 259 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 ROS1P08922 2347 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 MDH2P40926 338 aaKnown RBP13.76□□□□□ -0.21
UBE3A-227ENST00000638011 RRADP55042 308 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 OR51H1Q8NH63 302 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 UTP23Q9BRU9 249 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms