RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 BDH1Q02338 343 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 TPBGQ13641 420 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 CRMP1Q14194 572 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 ZNF846Q147U1 533 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 SSX1Q16384 188 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 SGCAQ16586 387 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 SLC36A2Q495M3 483 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 ZNF362Q5T0B9 420 aaPredicted RBP6.65□□□□□ -1.34
PNKP-229ENST00000637897 THEM4Q5T1C6 240 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 AVPI1Q5T686 147 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 LINC01356Q8N9X3 169 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 BBS1Q8NFJ9 593 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 MCFD2Q8NI22 146 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 SYNPRQ8TBG9 265 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 SLC25A40Q8TBP6 338 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 KLF14Q8TD94 323 aaPredicted RBP6.65□□□□□ -1.34
PNKP-229ENST00000637897 SLC7A6Q92536 515 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 RDH5Q92781 318 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 UFD1Q92890 307 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 HPS1Q92902 700 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 PTP4A1Q93096 173 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 MRPL48Q96GC5 212 aaKnown RBP6.65□□□□□ -1.34
PNKP-229ENST00000637897 TEAD3Q99594 435 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 COQ7Q99807 217 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 CHCHD6Q9BRQ6 235 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 ALG12Q9BV10 488 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 OR2J1Q9GZK6 312 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 WDR12Q9GZL7 423 aaKnown RBP6.65□□□□□ -1.34
PNKP-229ENST00000637897 SLIRPQ9GZT3 109 aaKnown RBP6.65□□□□□ -1.34
PNKP-229ENST00000637897 SHARPINQ9H0F6 387 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 OR51E2Q9H255 320 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 MS4A5Q9H3V2 200 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 RNF121Q9H920 327 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 NRIP3Q9NQ35 241 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 G6PC2Q9NQR9 355 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 POLE4Q9NR33 117 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 ERVK13-1Q9NX77 482 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 KCNS2Q9ULS6 477 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 IER3IP1Q9Y5U9 82 aa6.65□□□□□ -1.34
PNKP-229ENST00000637897 TENM1Q9UKZ4 2725 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 DAPL1A0PJW8 107 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 C5orf49A4QMS7 147 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 CCDC182A6NF36 153 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 J3QRE1 110 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 FARS2O95363 451 aaKnown RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 CD14P08571 375 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 DBHP09172 617 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 GAAP10253 952 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 HIST1H1CP16403 213 aaKnown RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 SRD5A1P18405 259 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 GALP22466 123 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 SLC2A5P22732 501 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 GABRA5P31644 462 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 CRYBB2P43320 205 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 ZNF84P51523 738 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 BMXP51813 675 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 DVL1P1P54792 670 aaPredicted RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 KLF3P57682 345 aaPredicted RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 MRPS11P82912 194 aaKnown RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 GALK2Q01415 458 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 PSG7Q13046 419 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 GPR50Q13585 617 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 GALEQ14376 348 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 TBC1D28Q2M2D7 210 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 TUSC1Q2TAM9 212 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 ZNF404Q494X3 552 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 KLHL12Q53G59 568 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 CCDC92Q53HC0 331 aaPredicted RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 SLC35D3Q5M8T2 416 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 LIPKQ5VXJ0 399 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 MBNL2Q5VZF2 373 aaKnown RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 GPR139Q6DWJ6 353 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 TMEM53Q6P2H8 277 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 ZNF322Q6U7Q0 402 aaPredicted RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 LHFPL3Q86UP9 236 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 PIP4P2Q8N4L2 257 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 ZNF485Q8NCK3 441 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 OR52E2Q8NGJ4 325 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 OR51G2Q8NGK0 314 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 OR1J1Q8NGS3 322 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 ZNRF4Q8WWF5 429 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 TSSK2Q96PF2 358 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 DDOQ99489 341 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 CENPOQ9BU64 300 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 OR51V1Q9H2C8 321 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 MED20Q9H944 212 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 CDH20Q9HBT6 801 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 LPAR2Q9HBW0 351 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 EXOSC4Q9NPD3 245 aaKnown RBP6.64□□□□□ -1.35
PNKP-229ENST00000637897 NKIRAS2Q9NYR9 191 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 FBXL3Q9UKT7 428 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 GSTK1Q9Y2Q3 226 aa6.64□□□□□ -1.35
PNKP-229ENST00000637897 TEX13CA0A0J9YWL9 993 aa6.63□□□□□ -1.35
PNKP-229ENST00000637897 PRSS37A4D1T9 235 aa6.63□□□□□ -1.35
PNKP-229ENST00000637897 C5orf63A6NC05 138 aa6.63□□□□□ -1.35
PNKP-229ENST00000637897 OR6C6A6NF89 314 aa6.63□□□□□ -1.35
PNKP-229ENST00000637897 METTL15A6NJ78 407 aa6.63□□□□□ -1.35
PNKP-229ENST00000637897 C12orf71A8MTZ7 269 aa6.63□□□□□ -1.35
PNKP-229ENST00000637897 ZNF670-ZNF695F2Z2N8 137 aa6.63□□□□□ -1.35
PNKP-229ENST00000637897 SPRY3O43610 288 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms