RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 SYT13Q7L8C5 426 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 TMPRSS9Q7Z410 1059 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 NAA40Q86UY6 237 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 SVBPQ8N300 66 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 ADPRHL1Q8NDY3 354 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 OR13C9Q8NGT0 318 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 TERB2Q8NHR7 220 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 FOXQ1Q9C009 403 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 ASF1BQ9NVP2 202 aa12.9□□□□□ -0.34
CLN6-215ENST00000636674 CARHSP1Q9Y2V2 147 aaKnown RBP12.9□□□□□ -0.34
CLN6-215ENST00000636674 A0A0A6YYD4 124 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 RHPN2P1A8MT19 583 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 EEF1E1-BLOC1S5C9J1V9 151 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 HIST1H1DP16402 221 aaKnown RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 AKR1C4P17516 323 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 LAP3P28838 519 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 DEFB133Q30KQ1 61 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 LANCL3Q6ZV70 420 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 PEG10Q86TG7 708 aaKnown RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 ANGPTL5Q86XS5 388 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 BAP18Q8IXM2 172 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 OR5AS1Q8N127 324 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 GTPBP8Q8N3Z3 284 aaPredicted RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 NARS2Q96I59 477 aaKnown RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 ZC3H10Q96K80 434 aaKnown RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 TSNAXQ99598 290 aaKnown RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 RNF126Q9BV68 326 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 RAB18Q9NP72 206 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 CYTL1Q9NRR1 136 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 SERINC1Q9NRX5 453 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 SLC39A1Q9NY26 324 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 B3GAT1Q9P2W7 334 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 SUSD2Q9UGT4 822 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 GPR132Q9UNW8 380 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 RPH3AQ9Y2J0 694 aaPredicted RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 IGHV1OR21-1A0A087WYE8 117 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 C2CD4DB7Z1M9 353 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 ZNF878C9JN71 531 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 PMP2P02689 132 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 CCL1P22362 96 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 SLC6A9P48067 706 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 CSNK1EP49674 416 aaKnown RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 BIDP55957 195 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 EIF3IQ13347 325 aaKnown RBP12.89□□□□□ -0.35
CLN6-215ENST00000636674 MICBQ29980 383 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 SLC25A53Q5H9E4 307 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 THEM4Q5T1C6 240 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 DRAM2Q6UX65 266 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 PGAP1Q75T13 922 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 KCNG3Q8TAE7 436 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 NUBPLQ8TB37 319 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 DCUN1D4Q92564 292 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 ARL11Q969Q4 196 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 TMEM230Q96A57 120 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 C5orf34Q96MH7 638 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 NICN1Q9BSH3 213 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 SRPK3Q9UPE1 567 aa12.89□□□□□ -0.35
CLN6-215ENST00000636674 SFT2D2O95562 160 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 ZNF20P17024 532 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 ADCYAP1P18509 176 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 FPR2P25090 351 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 HNRNPKP61978 463 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLN6-215ENST00000636674 FOXF1Q12946 379 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 NSUN5P2Q63ZY6 315 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 UNQ6126/PRO20091Q6UXV3 157 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 PLXDC1Q8IUK5 500 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 PRSS58Q8IYP2 241 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 PUSL1Q8N0Z8 303 aaKnown RBP12.88□□□□□ -0.35
CLN6-215ENST00000636674 ZSCAN4Q8NAM6 433 aaPredicted RBP12.88□□□□□ -0.35
CLN6-215ENST00000636674 RLN3Q8WXF3 142 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 OCSTAMPQ9BR26 566 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 TGIF2Q9GZN2 237 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 C5orf66Q9H5L9 145 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLN6-215ENST00000636674 MRPS28Q9Y2Q9 187 aaKnown RBP12.88□□□□□ -0.35
CLN6-215ENST00000636674 LHFPL6Q9Y693 200 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 VSTM2BA6NLU5 285 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 CDC14BO60729 498 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 FOLR1P15328 257 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 CBX5P45973 191 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 CFHR1Q03591 330 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 SCRN3Q0VDG4 424 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 HFEQ30201 348 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 PLAC9Q5JTB6 97 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 PRSS54Q6PEW0 395 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 COX15Q7KZN9 410 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 LHFPL1Q86WI0 220 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 KMT5CQ86Y97 462 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 ZNF101Q8IZC7 436 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 APCDD1LQ8NCL9 501 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 NOXO1Q8NFA2 376 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 SSC4DQ8WTU2 575 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 RAB3CQ96E17 227 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 SCGB3A2Q96PL1 93 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 AQP10Q96PS8 301 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 HPF1Q9NWY4 346 aa12.88□□□□□ -0.35
CLN6-215ENST00000636674 ZNF175Q9Y473 711 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms