RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TRABD2BA6NFA1 517 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF195O14628 629 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ZGLP1P0C6A0 271 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CALCBP10092 127 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 S100A11P31949 105 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 HNRNPA3P51991 378 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 FUT6P51993 359 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SPCS3P61009 180 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 FCRL6Q6DN72 434 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GDF7Q7Z4P5 450 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 MVB12AQ96EY5 273 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 HSD17B10Q99714 261 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF416Q9BWM5 594 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ANKRD60Q9BZ19 345 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 LAT2Q9GZY6 243 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 THAP10Q9P2Z0 257 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 MMP17Q9ULZ9 603 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CSAG2Q9Y5P2 127 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 DDX60Q8IY21 1712 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 M0R082 166 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 BMPR1BO00238 502 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 NEURL1O76050 574 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 RAF1P04049 648 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CD68P34810 354 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PCBP4P57723 403 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SHBQ15464 509 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 KCNMB1Q16558 191 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GSG1Q2KHT4 349 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TMEM52BQ4KMG9 183 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CYHR1Q6ZMK1 362 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 FBXL6Q8N531 539 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PRSS3P2Q8NHM4 247 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GPX8Q8TED1 209 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PCNPQ8WW12 178 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TMEM18Q96B42 140 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF778Q96MU6 729 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TIMP4Q99727 224 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 MS4A8Q9BY19 250 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GLIPR2Q9H4G4 154 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 DPH3P1Q9H4G8 78 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SLC7A10Q9NS82 523 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PRSS21Q9Y6M0 314 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR2J2O76002 312 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PTBP3O95758 552 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SCG5P05408 212 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SP1P08047 785 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ALOX5APP20292 161 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 KRTDAPP60985 99 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 LRRC26Q2I0M4 334 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TIGD3Q6B0B8 471 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 B3GNT8Q7Z7M8 397 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OSR2Q8N2R0 312 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PARP16Q8N5Y8 322 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 RELL2Q8NC24 303 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF485Q8NCK3 441 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TMEM255BQ8WV15 326 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 RPUSD4Q96CM3 377 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GON7Q9BXV9 100 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 S1PR5Q9H228 398 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TAS2R4Q9NYW5 299 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ASH2LQ9UBL3 628 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TRIP12Q14669 1992 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 UMAD1C9J7I0 102 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ARNTLO00327 626 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 DCTN6O00399 190 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 NME2P1O60361 137 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ICMTO60725 284 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR5AL1P0C617 328 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PPP1CBP62140 327 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TNFAIP6P98066 277 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR1C1Q15619 314 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 DUSP6Q16828 381 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF750Q32MQ0 723 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SLC25A30Q5SVS4 291 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 HSD17B13Q7Z5P4 300 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR13G1Q8NGZ3 307 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR2V1Q8NHB1 315 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR51E1Q8TCB6 317 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GHITMQ9H3K2 345 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 NDUFB11Q9NX14 153 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 IL36GQ9NZH8 169 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 NTNG1Q9Y2I2 539 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SLX4Q8IY92 1834 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 RGPD5Q99666 1765 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 hADV38S2A0JD32 116 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 HSPB2A8KAH6 182 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PNPP00491 289 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SDHAP31040 664 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CCKARP32238 428 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 KLF3P57682 345 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 HSPB2Q16082 182 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CTU2Q2VPK5 515 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 Q3ZCU0 254 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 LCN15Q6UWW0 184 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 NHLRC1Q6VVB1 395 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR52I1Q8NGK6 324 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GMLQ99445 158 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GPR84Q9NQS5 396 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR1A1Q9P1Q5 309 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ANXA10Q9UJ72 324 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms