RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FAM25AB3EWG3 89 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 FAM25CB3EWG5 89 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 FAM25GB3EWG6 89 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF878C9JN71 531 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 PRSS44E7EML9 344 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 PLA2G10O15496 165 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 SYNGR3O43761 229 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 SERPINA5P05154 406 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 CD1AP06126 327 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 H2BFMP0C1H6 154 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 MYL9P24844 172 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 RAB25P57735 213 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 C1QTNF12Q5T7M4 302 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 LRRN1Q6UXK5 716 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 SSX8Q7RTT4 187 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.54□□□□□ -0.4
LINC00339-208ENST00000634934 RNF170Q96K19 258 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 ATF6BQ99941 703 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 ALG8Q9BVK2 526 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 C11orf54Q9H0W9 315 aaPredicted RBP12.54□□□□□ -0.4
LINC00339-208ENST00000634934 PNRC2Q9NPJ4 139 aaKnown RBP12.54□□□□□ -0.4
LINC00339-208ENST00000634934 FBXL3Q9UKT7 428 aa12.54□□□□□ -0.4
LINC00339-208ENST00000634934 KLF2Q9Y5W3 355 aaPredicted RBP12.54□□□□□ -0.4
LINC00339-208ENST00000634934 HCFC1P51610 2035 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 GABRPO00591 440 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 SSX4O60224 188 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 IGKV3-15P01624 115 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 CCL2P13500 99 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF14P17017 642 aaPredicted RBP12.53□□□□□ -0.4
LINC00339-208ENST00000634934 CCNOP22674 350 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 STOMP27105 288 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 HSD11B1P28845 292 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 ERP29P30040 261 aaKnown RBP12.53□□□□□ -0.4
LINC00339-208ENST00000634934 APLNRP35414 380 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 KIR2DL3P43628 341 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 MAP2K3P46734 347 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 GDI2P50395 445 aaKnown RBP12.53□□□□□ -0.4
LINC00339-208ENST00000634934 BTG1P62324 171 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 GALK2Q01415 458 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 EGR3Q06889 387 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 ECH1Q13011 328 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 GALEQ14376 348 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 TP53I3Q53FA7 332 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 ZMAT1Q5H9K5 638 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 OR2G6Q5TZ20 316 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 MYPOPQ86VE0 399 aaPredicted RBP12.53□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF584Q8IVC4 421 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 YIPF7Q8N8F6 280 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 SLC30A7Q8NEW0 376 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 GRPEL2Q8TAA5 225 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 GATAD2BQ8WXI9 593 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 MRPL48Q96GC5 212 aaKnown RBP12.53□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF75AQ96N20 296 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 NEDD4LQ96PU5 975 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 OR8B4Q96RC9 309 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 MARVELD1Q9BSK0 173 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 ELOVL3Q9HB03 270 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF275Q9NSD4 429 aaPredicted RBP12.53□□□□□ -0.4
LINC00339-208ENST00000634934 GNG8Q9UK08 70 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 CENPEQ02224 2701 aa12.53□□□□□ -0.4
LINC00339-208ENST00000634934 IGHV1-18A0A0C4DH31 117 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 C5orf49A4QMS7 147 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 OR6C6A6NF89 314 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 F5H5K5 113 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 J3QLW9 94 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 CASKO14936 926 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 RGS9O75916 674 aaPredicted RBP12.52□□□□□ -0.4
LINC00339-208ENST00000634934 DBHP09172 617 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF19P17023 458 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 ROM1Q03395 351 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 HSD17B12Q53GQ0 312 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 FAM220AQ7Z4H9 259 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF679Q8IYX0 411 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 FAM169BQ8N8A8 192 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 ASCC1Q8N9N2 400 aaKnown RBP12.52□□□□□ -0.4
LINC00339-208ENST00000634934 GON7Q9BXV9 100 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 NGBQ9NPG2 151 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 DDX28Q9NUL7 540 aaKnown RBP12.52□□□□□ -0.4
LINC00339-208ENST00000634934 BABAM2Q9NXR7 383 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 MRM2Q9UI43 246 aaKnown RBP12.52□□□□□ -0.4
LINC00339-208ENST00000634934 LRP12Q9Y561 859 aa12.52□□□□□ -0.4
LINC00339-208ENST00000634934 PRR14LQ5THK1 2151 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 LOC100509620A0A075B734 347 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 PLPP2O43688 288 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 RPP14O95059 124 aaKnown RBP12.52□□□□□ -0.41
LINC00339-208ENST00000634934 IGLV1-44P01699 117 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 CECR9P0C854 216 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 COX5BP10606 129 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 SLC2A2P11168 524 aaPredicted RBP12.52□□□□□ -0.41
LINC00339-208ENST00000634934 NR4A2P43354 598 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 PRKXP51817 358 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 RIDAP52758 137 aaKnown RBP12.52□□□□□ -0.41
LINC00339-208ENST00000634934 OR12D2P58182 307 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 ACTA2P62736 377 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 GRB2P62993 217 aaKnown RBP12.52□□□□□ -0.41
LINC00339-208ENST00000634934 ACTG2P63267 376 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 TBC1D28Q2M2D7 210 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 PYDC2Q56P42 97 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 TRIQKQ629K1 86 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms