RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 A6NLC8 198 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 BBIP1A8MTZ0 92 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 RNASEK-C17orf49H0YIS7 233 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.57□□□□□ -0.72
LINC00339-206ENST00000634451 M0R135 149 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 PTBP3O95758 552 aaKnown RBP10.57□□□□□ -0.72
LINC00339-206ENST00000634451 H1F0P07305 194 aaKnown RBP10.57□□□□□ -0.72
LINC00339-206ENST00000634451 GSK3BP49841 420 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 NPY4RP50391 375 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 SLC7A2P52569 658 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 CD276Q5ZPR3 534 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 DHRS7BQ6IAN0 325 aaPredicted RBP10.57□□□□□ -0.72
LINC00339-206ENST00000634451 DPY19L2P2Q6ZN68 376 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 LYG1Q8N1E2 194 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 OR56B2PQ8NGI1 322 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 ITPKCQ96DU7 683 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 ZNF799Q96GE5 643 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 FUZQ9BT04 418 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 C16orf95Q9H693 158 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 FGFR1OP2Q9NVK5 253 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 ZNRD1Q9P1U0 126 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 CYB5R1Q9UHQ9 305 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 RPUSD1Q9UJJ7 312 aaKnown RBP10.57□□□□□ -0.72
LINC00339-206ENST00000634451 FOXJ3Q9UPW0 622 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 TMEM5Q9Y2B1 443 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 V9GYQ6 96 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 CSF1P09603 554 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 GMFBP60983 142 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 PCK2Q16822 640 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 RFX4Q33E94 735 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 WDR38Q5JTN6 314 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 SMARCD3Q6STE5 483 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 RRM2BQ7LG56 351 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 Q8N7P7 452 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 PNLDC1Q8NA58 520 aaKnown RBP10.56□□□□□ -0.72
LINC00339-206ENST00000634451 OR5T2Q8NGG2 359 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 OR51L1Q8NGJ5 315 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 FANK1Q8TC84 345 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 ERGIC1Q969X5 290 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 PPA2Q9H2U2 334 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 OR52D1Q9H346 318 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 KIF17Q9P2E2 1029 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 VPREB3Q9UKI3 123 aa10.56□□□□□ -0.72
LINC00339-206ENST00000634451 TRAV38-1A0A0B4J264 116 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 A0A1W2PRQ8 180 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 GGT3PA6NGU5 568 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 ACOT8O14734 319 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 GSTA4O15217 222 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 NPPAP01160 153 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 LHBP01229 141 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 HLA-DQA2P01906 255 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 LIPFP07098 398 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 CRABP1P29762 137 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 RPS6KA3P51812 740 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 PRKXP51817 358 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 MALLQ13021 153 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 IKZF1Q13422 519 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 DGCR6Q14129 220 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 C2orf68Q2NKX9 166 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 SLC35F1Q5T1Q4 408 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 SLC35E4Q6ICL7 350 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 C1orf122Q6ZSJ8 110 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 CYB561A3Q8NBI2 242 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 LY6G5BQ8NDX9 201 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 LRRC29Q8WV35 223 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 FAM162AQ96A26 154 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 C7orf34Q96L11 122 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 ANKRD19PQ9H560 264 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 CNTD2Q9H8S5 307 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 GID8Q9NWU2 228 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 AURKCQ9UQB9 309 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 CAPN7Q9Y6W3 813 aa10.55□□□□□ -0.72
LINC00339-206ENST00000634451 TSPAN9O75954 239 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 TROVE2P10155 538 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC00339-206ENST00000634451 TPTEP56180 551 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
LINC00339-206ENST00000634451 FAM189A2Q15884 450 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 LY6EQ16553 131 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 TEX36Q5VZQ5 186 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 C8orf82Q6P1X6 216 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-206ENST00000634451 DNM1P34Q6PK57 102 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 GDPGP1Q6ZNW5 385 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 ZBTB46Q86UZ6 589 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 OR2AJ1Q8NGZ0 328 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 RORBQ92753 470 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 DHRS1Q96LJ7 313 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 SIKE1Q9BRV8 207 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 IFT27Q9BW83 186 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 NDEL1Q9GZM8 345 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 NSRP1Q9H0G5 558 aaKnown RBP10.54□□□□□ -0.72
LINC00339-206ENST00000634451 ELL3Q9HB65 397 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-206ENST00000634451 SNTG1Q9NSN8 517 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 FAM96BQ9Y3D0 163 aa10.54□□□□□ -0.72
LINC00339-206ENST00000634451 HMGB1P1B2RPK0 211 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-206ENST00000634451 NPFFO15130 113 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms