RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PGAP1Q75T13 922 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 PRSS45Q7RTY3 260 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 KCTD20Q7Z5Y7 419 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 ZNF786Q8N393 782 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 OR8B12Q8NGG6 310 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 C4orf36Q96KX1 117 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 JAM3Q9BX67 310 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 OPA3Q9H6K4 179 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 MYEF2Q9P2K5 600 aaKnown RBP12.59□□□□□ -0.39
PNKP-221ENST00000627317 TPRKBQ9Y3C4 175 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 TMEM129A0AVI4 362 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 PLSCR5A0PG75 271 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 DENRO43583 198 aaKnown RBP12.58□□□□□ -0.4
PNKP-221ENST00000627317 INHBBP09529 407 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 CCDC159P0C7I6 412 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 SELEP16581 610 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 ANOS1P23352 680 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 CFL1P23528 166 aaKnown RBP12.58□□□□□ -0.4
PNKP-221ENST00000627317 CDKN1AP38936 164 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 ALDH3B1P43353 468 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 MMP16P51512 607 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 OR12D2P58182 307 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 ZNF92Q03936 586 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 PSG7Q13046 419 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 GK2Q14410 553 aaPredicted RBP12.58□□□□□ -0.4
PNKP-221ENST00000627317 MST1LQ2TV78 715 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 ALKBH6Q3KRA9 238 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 TMPRSS11AQ6ZMR5 421 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 BIVMQ86UB2 503 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 COMMD2Q86X83 199 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 SYS1Q8N2H4 156 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 MYDGFQ969H8 173 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 HAVCR1Q96D42 359 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 REEP6Q96HR9 211 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 PBOV1Q9GZY1 135 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 CGGBP1Q9UFW8 167 aaPredicted RBP12.58□□□□□ -0.4
PNKP-221ENST00000627317 NUFIP1Q9UHK0 495 aaKnown RBP12.58□□□□□ -0.4
PNKP-221ENST00000627317 PURGQ9UJV8 347 aaKnown RBP12.58□□□□□ -0.4
PNKP-221ENST00000627317 BLOC1S6Q9UL45 172 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 SNX5Q9Y5X3 404 aa12.58□□□□□ -0.4
PNKP-221ENST00000627317 GGT3PA6NGU5 568 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 PTGES3LE9PB15 166 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 H7C1Q1 480 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 NDUFS7O75251 213 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 ERCC1P07992 297 aaPredicted RBP12.57□□□□□ -0.4
PNKP-221ENST00000627317 ADRA2AP08913 450 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 LIMS3P0CW19 117 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 LIMS4P0CW20 117 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 KITLGP21583 273 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 PSMB10P40306 273 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 PPOXP50336 477 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 ETV1P50549 477 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 PRSS12P56730 875 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 ZMAT1Q5H9K5 638 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 RBM48Q5RL73 367 aaKnown RBP12.57□□□□□ -0.4
PNKP-221ENST00000627317 OR2T2Q6IF00 324 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 OR5AS1Q8N127 324 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 KLHL36Q8N4N3 616 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 RORBQ92753 470 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
PNKP-221ENST00000627317 SIGLEC11Q96RL6 698 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 VRK1Q99986 396 aaPredicted RBP12.57□□□□□ -0.4
PNKP-221ENST00000627317 RGCCQ9H4X1 137 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 FKBP14Q9NWM8 211 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 ZNF391Q9UJN7 358 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 OR52A1Q9UKL2 312 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 CAB39Q9Y376 341 aaPredicted RBP12.57□□□□□ -0.4
PNKP-221ENST00000627317 PCDHGB5Q9Y5G0 923 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 ARFGEF3Q5TH69 2177 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 TLN2Q9Y4G6 2542 aa12.57□□□□□ -0.4
PNKP-221ENST00000627317 H7C417 338 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 MYL12BO14950 172 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 SRSF10O75494 262 aaKnown RBP12.56□□□□□ -0.4
PNKP-221ENST00000627317 PNPP00491 289 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 CDK1P06493 297 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 HTR1AP08908 422 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 GBX2P52951 348 aaPredicted RBP12.56□□□□□ -0.4
PNKP-221ENST00000627317 TMEM255AQ5JRV8 349 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 CATSPERDQ86XM0 798 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 EGFL6Q8IUX8 553 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 SPRYD4Q8WW59 207 aaPredicted RBP12.56□□□□□ -0.4
PNKP-221ENST00000627317 SPSB4Q96A44 273 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 SGK3Q96BR1 496 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 PELI1Q96FA3 418 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 MS4A5Q9H3V2 200 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 ISG20L2Q9H9L3 353 aaKnown RBP12.56□□□□□ -0.4
PNKP-221ENST00000627317 CYSLTR2Q9NS75 346 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 ZNF319Q9P2F9 582 aa12.56□□□□□ -0.4
PNKP-221ENST00000627317 A0A0U1RQV5 110 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 hCG_38984A0A1B0GV85 526 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 CD300LBA8K4G0 201 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 IQCF6A8MYZ5 107 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 NAT2P11245 290 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 CRHBPP24387 322 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 EEF1B2P24534 225 aaKnown RBP12.55□□□□□ -0.4
PNKP-221ENST00000627317 C21orf33P30042 268 aaPredicted RBP12.55□□□□□ -0.4
PNKP-221ENST00000627317 LIPAP38571 399 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 ZNF81P51508 661 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 SLC35A2P78381 396 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms