RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 PEX14O75381 377 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 LPLP06858 475 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 ZNF32P17041 273 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 GSK3AP49840 483 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 ARG2P78540 354 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 GUCA2AQ02747 115 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 GFOD2Q3B7J2 385 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 CD276Q5ZPR3 534 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 PAQR4Q8N4S7 273 aaPredicted RBP19.33■□□□□ 0.68
PNKP-220ENST00000627232 TMEM178AQ8NBL3 297 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 PRSS33Q8NF86 280 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 FYTTD1Q96QD9 318 aaKnown RBP19.33■□□□□ 0.68
PNKP-220ENST00000627232 OR51J1Q9H342 316 aa19.33■□□□□ 0.68
PNKP-220ENST00000627232 ZNF552Q9H707 407 aaPredicted RBP19.33■□□□□ 0.68
PNKP-220ENST00000627232 ZNF107Q9UII5 783 aaPredicted RBP19.33■□□□□ 0.68
PNKP-220ENST00000627232 C5orf63A6NC05 138 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 TMEM14DPA8MWL7 114 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 VSIG8P0DPA2 414 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 PRF1P14222 555 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 B4GALT1P15291 398 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 STOMP27105 288 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 MAB21L1Q13394 359 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 ZNF766Q5HY98 468 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 AWAT2Q6E213 333 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 OR10K2Q6IF99 312 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 UTS2BQ765I0 119 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 FGD2Q7Z6J4 655 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 NOXA1Q86UR1 476 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 LIX1LQ8IVB5 337 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 PP6455Q8WZ26 134 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 SEH1LQ96EE3 360 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 RNF170Q96K19 258 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 PRRX2Q99811 253 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 BCO1Q9HAY6 547 aa19.32■□□□□ 0.68
PNKP-220ENST00000627232 CACNA1HO95180 2353 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 DHRS7CA6NNS2 312 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 RPL36A-HNRNPH2H7BZ11 118 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 FARS2O95363 451 aaKnown RBP19.31■□□□□ 0.68
PNKP-220ENST00000627232 YES1P07947 543 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 DBHP09172 617 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 UBBP0CG47 229 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 AKAIN1P0CW23 69 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
PNKP-220ENST00000627232 UNC119Q13432 240 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 TSPO2Q5TGU0 170 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.31■□□□□ 0.68
PNKP-220ENST00000627232 ANGPTL5Q86XS5 388 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 GIMAP1Q8WWP7 306 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 BEX2Q9BXY8 128 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 OR2H1Q9GZK4 316 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 EXO5Q9H790 373 aa19.31■□□□□ 0.68
PNKP-220ENST00000627232 MRPS28Q9Y2Q9 187 aaKnown RBP19.31■□□□□ 0.68
PNKP-220ENST00000627232 RAB27BO00194 218 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 NDUFB6O95139 128 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 HCKP08631 526 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 MECP2P51608 486 aaKnown RBP19.3■□□□□ 0.68
PNKP-220ENST00000627232 RNPS1Q15287 305 aaKnown RBP19.3■□□□□ 0.68
PNKP-220ENST00000627232 FAM189A2Q15884 450 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 ZNF774Q6NX45 483 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 SLC16A14Q7RTX9 510 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 VASH2Q86V25 355 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 TMEM229BQ8NBD8 167 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 OR4C16Q8NGL9 310 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 AQP3Q92482 292 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 TP63Q9H3D4 680 aaPredicted RBP19.3■□□□□ 0.68
PNKP-220ENST00000627232 TTC28Q96AY4 2481 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 IGKV1-9A0A0C4DH69 117 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 TGM6O95932 706 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 ITGB2P05107 769 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 GTF2F2P13984 249 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 TAS2R19P59542 299 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 PSG4Q00888 419 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 FCN2Q15485 313 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 LINC00303Q3SY05 128 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 MOGAT2Q3SYC2 334 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 SKA3Q8IX90 412 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 SGK3Q96BR1 496 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 PRRG4Q9BZD6 226 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 CHST5Q9GZS9 411 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 WNT5BQ9H1J7 359 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 NOX3Q9HBY0 568 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 MYEF2Q9P2K5 600 aaKnown RBP19.3■□□□□ 0.68
PNKP-220ENST00000627232 ATPIF1Q9UII2 106 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 ZNF391Q9UJN7 358 aa19.3■□□□□ 0.68
PNKP-220ENST00000627232 DMDP11532 3685 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 A0A1B0GUH1 482 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 NKX2-8O15522 239 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 ICMTO60725 284 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 C1QBP02746 253 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 CHRM2P08172 466 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 NBL1P41271 181 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 ZNF260Q3ZCT1 412 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 GLIPR1L1Q6UWM5 242 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 TUSC5Q8IXB3 177 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 ACBD4Q8NC06 268 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 KCNG3Q8TAE7 436 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 C1orf147Q96MC9 270 aaPredicted RBP19.29■□□□□ 0.68
PNKP-220ENST00000627232 NKIRAS2Q9NYR9 191 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 ZNF224Q9NZL3 707 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 GHRLQ9UBU3 117 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms