RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 HLA-DQA1Q5Y7H0 255 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 VASNQ6EMK4 673 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 TEX38Q6PEX7 206 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 SIAH3Q8IW03 269 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF615Q8N8J6 731 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 SLC37A3Q8NCC5 494 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 APCDD1LQ8NCL9 501 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 C16orf52Q8NHV5 167 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 RNF170Q96K19 258 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 FYTTD1Q96QD9 318 aaKnown RBP10.29□□□□□ -0.76
LINC00538-201ENST00000626109 RAB40CQ96S21 281 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 ZFAND5O76080 213 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 F10P00742 488 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 CLPSP04118 112 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 SERPINA7P05543 415 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 GUSBP08236 651 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 GKN3PP0CG01 181 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 ELK1P19419 428 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 NPR2P20594 1047 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 TBXA2RP21731 343 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 SLC6A6P31641 620 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 RBM34P42696 430 aaKnown RBP10.29□□□□□ -0.76
LINC00538-201ENST00000626109 EMDP50402 254 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 RRAS2P62070 204 aaPredicted RBP10.29□□□□□ -0.76
LINC00538-201ENST00000626109 PITPNAQ00169 270 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 ZNHIT3Q15649 155 aaPredicted RBP10.29□□□□□ -0.76
LINC00538-201ENST00000626109 SLC25A53Q5H9E4 307 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 ARL9Q6T311 187 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 OAFQ86UD1 273 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 C17orf78Q8N4C9 275 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 YIPF7Q8N8F6 280 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 OR5L2Q8NGL0 311 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 PFN4Q8NHR9 129 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 ABHD4Q8TB40 342 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 ZFAND1Q8TCF1 268 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 HOXB13Q92826 284 aaPredicted RBP10.29□□□□□ -0.76
LINC00538-201ENST00000626109 DCLRE1CQ96SD1 692 aaKnown RBP10.29□□□□□ -0.76
LINC00538-201ENST00000626109 THAP7Q9BT49 309 aaPredicted RBP10.29□□□□□ -0.76
LINC00538-201ENST00000626109 DEFB126Q9BYW3 111 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 LDAHQ9H6V9 325 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 B3GAT2Q9NPZ5 323 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 ATP13A2Q9NQ11 1180 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 SHISA3A0PJX4 238 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 CCSO14618 274 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 HSPA12AO43301 675 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 CHP2O43745 196 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 AMY1AP04745 511 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 CELA2AP08217 269 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 FAM157BP0CG42 384 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 ARSBP15848 533 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 HTR2AP28223 471 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 GABRA3P34903 492 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 TMPRSS3P57727 454 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 TNK1Q13470 666 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 EBPQ15125 230 aaKnown RBP10.28□□□□□ -0.76
LINC00538-201ENST00000626109 MAPK14Q16539 360 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 VWC2Q2TAL6 325 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 TEX30Q5JUR7 227 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 CEACAM19Q7Z692 300 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 C9orf40Q8IXQ3 194 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 TMEM99Q8N816 258 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 TBX5Q99593 518 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 WWTR1Q9GZV5 400 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 LPAR2Q9HBW0 351 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 PLEK2Q9NYT0 353 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 STMN3Q9NZ72 180 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 SIGLEC7Q9Y286 467 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 TBL2Q9Y4P3 447 aaKnown RBP10.28□□□□□ -0.76
LINC00538-201ENST00000626109 KPTNQ9Y664 436 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 URGCP-MRPS24S4R325 110 aa10.28□□□□□ -0.76
LINC00538-201ENST00000626109 J3QLW9 94 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 OGG1O15527 345 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 REM1O75628 298 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 ALX3O95076 343 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 CRYABP02511 175 aaKnown RBP10.27□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF19P17023 458 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 ITGA3P26006 1051 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 SHC1P29353 583 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 GZMKP49863 264 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 RELBQ01201 579 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 INSL4Q14641 139 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 DEFB109BQ30KR1 87 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 SLC22A10Q63ZE4 541 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 SFXN4Q6P4A7 337 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 RNASEKQ6P5S7 137 aaKnown RBP10.27□□□□□ -0.76
LINC00538-201ENST00000626109 BAIAP2L2Q6UXY1 529 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF546Q86UE3 836 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 ZFP82Q8N141 532 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 SAMD12Q8N8I0 201 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 TMEM104Q8NE00 496 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 NUBPLQ8TB37 319 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 SMPDL3BQ92485 455 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 NRGNQ92686 78 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 FOXRED1Q96CU9 486 aaPredicted RBP10.27□□□□□ -0.76
LINC00538-201ENST00000626109 HYLS1Q96M11 299 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 VSTM2LQ96N03 204 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 BARX1Q9HBU1 254 aaPredicted RBP10.27□□□□□ -0.76
LINC00538-201ENST00000626109 C20orf141Q9NUB4 165 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 COPZ2Q9P299 210 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms