RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ASH2LQ9UBL3 628 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 IKZF2Q9UKS7 526 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 SF3B6Q9Y3B4 125 aaKnown RBP10.87□□□□□ -0.67
PNKP-217ENST00000625216 KRT8P05787 483 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 USF1P22415 310 aaPredicted RBP10.86□□□□□ -0.67
PNKP-217ENST00000625216 GALK2Q01415 458 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 CDK5R1Q15078 307 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 TMEM249Q2WGJ8 235 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 TMEM53Q6P2H8 277 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 FAM220AQ7Z4H9 259 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 YIPF7Q8N8F6 280 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 RPS4Y2Q8TD47 263 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 RNF133Q8WVZ7 376 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 C12orf43Q96C57 262 aaKnown RBP10.86□□□□□ -0.67
PNKP-217ENST00000625216 SLAMF6Q96DU3 332 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 PIMREGQ9BSJ6 248 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 OR51E2Q9H255 320 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 MS4A5Q9H3V2 200 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 PNRC2Q9NPJ4 139 aaKnown RBP10.86□□□□□ -0.67
PNKP-217ENST00000625216 NDUFB11Q9NX14 153 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 RSL24D1Q9UHA3 163 aaKnown RBP10.86□□□□□ -0.67
PNKP-217ENST00000625216 LRP12Q9Y561 859 aa10.86□□□□□ -0.67
PNKP-217ENST00000625216 ABCA1O95477 2261 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 A8MV72 311 aaPredicted RBP10.85□□□□□ -0.67
PNKP-217ENST00000625216 VWC2LB2RUY7 222 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 H3BMQ9 156 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 RER1O15258 196 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 OGG1O15527 345 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 GPRIN2O60269 458 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 SULT1C4O75897 302 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 RPP14O95059 124 aaKnown RBP10.85□□□□□ -0.67
PNKP-217ENST00000625216 CST2P09228 141 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 OPRL1P41146 370 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 GBX2P52951 348 aaPredicted RBP10.85□□□□□ -0.67
PNKP-217ENST00000625216 TAS2R43P59537 309 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 NANOS3P60323 173 aaKnown RBP10.85□□□□□ -0.67
PNKP-217ENST00000625216 HIST1H3AP68431 136 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 PLP2Q04941 152 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 MFGE8Q08431 387 aaPredicted RBP10.85□□□□□ -0.67
PNKP-217ENST00000625216 AQP6Q13520 282 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 CTF1Q16619 201 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 HIST2H3PS2Q5TEC6 136 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 FAM27BQ5VT28 67 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 LIPNQ5VXI9 398 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 DMKNQ6E0U4 476 aaPredicted RBP10.85□□□□□ -0.67
PNKP-217ENST00000625216 ARL9Q6T311 187 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 HIST2H3AQ71DI3 136 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 SLC16A14Q7RTX9 510 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 KRT77Q7Z794 578 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 ZNF679Q8IYX0 411 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 LRRC18Q8N456 261 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 OR1J2Q8NGS2 313 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 OR2AJ1Q8NGZ0 328 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 ZNF420Q8TAQ5 688 aaPredicted RBP10.85□□□□□ -0.67
PNKP-217ENST00000625216 FGFBP3Q8TAT2 258 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 MRPL24Q96A35 216 aaKnown RBP10.85□□□□□ -0.67
PNKP-217ENST00000625216 PGLYRP3Q96LB9 341 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 SH3GL3Q99963 347 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 CDADC1Q9BWV3 514 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 KCNN2Q9H2S1 579 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 RNF121Q9H920 327 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 SIAEQ9HAT2 523 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 ELOVL3Q9HB03 270 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 DYNLRB1Q9NP97 96 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 YAE1D1Q9NRH1 226 aa10.85□□□□□ -0.67
PNKP-217ENST00000625216 ZNF878C9JN71 531 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 SYNGR3O43761 229 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 SRSF10O75494 262 aaKnown RBP10.84□□□□□ -0.67
PNKP-217ENST00000625216 GPX5O75715 221 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 LY6HO94772 140 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 PATE4P0C8F1 98 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 CELP19835 753 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 TGFBR1P36897 503 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 GUCA1AP43080 201 aaPredicted RBP10.84□□□□□ -0.67
PNKP-217ENST00000625216 NR4A2P43354 598 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 KIR3DL2P43630 455 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 TGM4P49221 684 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 GZMKP49863 264 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 RIDAP52758 137 aaKnown RBP10.84□□□□□ -0.67
PNKP-217ENST00000625216 TMBIM6P55061 237 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 CCDC92Q53HC0 331 aaPredicted RBP10.84□□□□□ -0.67
PNKP-217ENST00000625216 CYB5R2Q6BCY4 276 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 KCTD18Q6PI47 426 aaPredicted RBP10.84□□□□□ -0.67
PNKP-217ENST00000625216 KCTD20Q7Z5Y7 419 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 ZNF584Q8IVC4 421 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 SLC30A7Q8NEW0 376 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 RAB2BQ8WUD1 216 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 DGCR14Q96DF8 476 aaKnown RBP10.84□□□□□ -0.67
PNKP-217ENST00000625216 DCLRE1CQ96SD1 692 aaKnown RBP10.84□□□□□ -0.67
PNKP-217ENST00000625216 MYCBPQ99417 103 aaPredicted RBP10.84□□□□□ -0.67
PNKP-217ENST00000625216 RNF167Q9H6Y7 350 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 CENPMQ9NSP4 180 aa10.84□□□□□ -0.67
PNKP-217ENST00000625216 IQCMA0A1B0GVH7 501 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 ZNF701M0R085 212 aaPredicted RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 M0R233 179 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 PLPP2O43688 288 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 AIREO43918 545 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 NOL3O60936 208 aaKnown RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 PNPP00491 289 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms