RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 ANGPTL4Q9BY76 406 aa10.56□□□□□ -0.72
TP53-227ENST00000622645 LPAR5Q9H1C0 372 aa10.56□□□□□ -0.72
TP53-227ENST00000622645 NCOA6Q14686 2063 aaPredicted RBP10.56□□□□□ -0.72
TP53-227ENST00000622645 OR6C65A6NJZ3 312 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 F5H5K5 113 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 ERCC1P07992 297 aaPredicted RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 CYC1P08574 325 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 HCKP08631 526 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 RRASP10301 218 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 TDGF1P13385 188 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 FKBP2P26885 142 aaKnown RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 HOXD11P31277 338 aaPredicted RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 CD96P40200 585 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 CSNK1A1P48729 337 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 SSR4P51571 173 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 MEF2DQ14814 521 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 EXT1Q16394 746 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 AANATQ16613 207 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 LIN54Q6MZP7 749 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 RPS19BP1Q86WX3 136 aaKnown RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 LIN37Q96GY3 246 aaPredicted RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 TMEM41AQ96HV5 264 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 C1orf147Q96MC9 270 aaPredicted RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 C1QTNF6Q9BXI9 259 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 IFT46Q9NQC8 304 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 COQ3Q9NZJ6 369 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 IGKV1-9A0A0C4DH69 117 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 POM121CA8CG34 1229 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 CCSO14618 274 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 SOCS1O15524 211 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 GMFBP60983 142 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 SMUG1Q53HV7 270 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 TRIM61Q5EBN2 209 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 PLAC9Q5JTB6 97 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 DTX1Q86Y01 620 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 OR5D18Q8NGL1 313 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 OR2Y1Q8NGV0 311 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 PAQR8Q8TEZ7 354 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 NPRL2Q8WTW4 380 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 GPER1Q99527 375 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 PRRT1Q99946 306 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 RBM24Q9BX46 236 aaKnown RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 CST11Q9H112 138 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 ZNF224Q9NZL3 707 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 NOP16Q9Y3C1 178 aaKnown RBP10.55□□□□□ -0.72
TP53-227ENST00000622645 ZDBF2Q9HCK1 2354 aa10.55□□□□□ -0.72
TP53-227ENST00000622645 A0A087WZY1 265 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 TRAV14DV4A0A0A6YYC5 116 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 NSG1A0A0A6YYJ2 146 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 OR5H15A6NDH6 313 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 OR2AT4A6NND4 320 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 RP2O75695 350 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 PMP2P02689 132 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 CD63P08962 238 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 CD34P28906 385 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 GUCA1AP43080 201 aaPredicted RBP10.54□□□□□ -0.72
TP53-227ENST00000622645 SLC6A9P48067 706 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 DSCR4P56555 118 aaPredicted RBP10.54□□□□□ -0.72
TP53-227ENST00000622645 PPP1R1AQ13522 171 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 PGAP1Q75T13 922 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 SEC22AQ96IW7 307 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 LYZL4Q96KX0 146 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 MFFQ9GZY8 342 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 SMOC1Q9H4F8 434 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 DKKL1Q9UK85 242 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 A0A0J9YW62 118 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 NPIPA2E9PIF3 369 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 NPIPA3F8WFD2 350 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 TNFSF11O14788 317 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 YKT6O15498 198 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 CDC14BO60729 498 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 STK17BO94768 372 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 MSR1P21757 451 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 CASRP41180 1078 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 MC2RQ01718 297 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 LRRC37A5PQ49AS3 106 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 CLVS2Q5SYC1 327 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 DOK3Q7L591 496 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 BEST3Q8N1M1 668 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 OR14K1Q8NGZ2 314 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 COQ8AQ8NI60 647 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 M1APQ8TC57 530 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 ZNF837Q96EG3 531 aaPredicted RBP10.54□□□□□ -0.72
TP53-227ENST00000622645 PGAM5Q96HS1 289 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 MYOZ1Q9NP98 299 aaPredicted RBP10.54□□□□□ -0.72
TP53-227ENST00000622645 HPF1Q9NWY4 346 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 SLC2A8Q9NY64 477 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 RDH8Q9NYR8 311 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 FBLN5Q9UBX5 448 aa10.54□□□□□ -0.72
TP53-227ENST00000622645 RFPL4AA6NLU0 287 aa10.53□□□□□ -0.72
TP53-227ENST00000622645 RFPL4AL1F8VTS6 287 aa10.53□□□□□ -0.72
TP53-227ENST00000622645 LAMTOR5O43504 91 aa10.53□□□□□ -0.72
TP53-227ENST00000622645 CRTAPO75718 401 aaPredicted RBP10.53□□□□□ -0.72
TP53-227ENST00000622645 CCL1P22362 96 aa10.53□□□□□ -0.72
TP53-227ENST00000622645 TMEM50BP56557 158 aa10.53□□□□□ -0.72
TP53-227ENST00000622645 RPS18P62269 152 aaKnown RBP10.53□□□□□ -0.72
TP53-227ENST00000622645 GRB2P62993 217 aaKnown RBP10.53□□□□□ -0.72
TP53-227ENST00000622645 ENDOGQ14249 297 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms