RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ALKBH3Q96Q83 286 aaPredicted RBP7.11□□□□□ -1.27
VPS11-209ENST00000622309 TP53RKQ96S44 253 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SLC6A7Q99884 636 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 DPH1Q9BZG8 443 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 OR2J1Q9GZK6 312 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SLCO5A1Q9H2Y9 848 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 CHST11Q9NPF2 352 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 CMC2Q9NRP2 79 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 CUTCQ9NTM9 273 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 MSRAQ9UJ68 235 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 HIF3AQ9Y2N7 669 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 NKX6-3A6NJ46 265 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 ZNF705FA8MVS1 300 aaPredicted RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 PEX12O00623 359 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 AQP7O14520 342 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 IL2RAP01589 272 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 SOD2P04179 222 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 ZNF705DP0CH99 300 aaPredicted RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 ZNF705BP0CI00 300 aaPredicted RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 TFPI2P48307 235 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 EFNB2P52799 333 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 VAMP2P63027 116 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 CRMP1Q14194 572 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 GXYLT1Q4G148 440 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 ZNF679Q8IYX0 411 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 MFSD9Q8NBP5 474 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 SUN3Q8TAQ9 357 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 DIO2Q92813 273 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 SMIM3Q9BZL3 60 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 SEPSECSQ9HD40 501 aaKnown RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 IL26Q9NPH9 171 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 HAO2Q9NYQ3 351 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 GSKIPQ9P0R6 139 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 ICKQ9UPZ9 632 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 RCBTB2O95199 551 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 EPPINO95925 133 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 IGSF6O95976 241 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 IL6RP08887 468 aaPredicted RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 ZGLP1P0C6A0 271 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 SLC35G6P0C7Q6 338 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 OR2T7P0C7T2 308 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 IRF1P10914 325 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 FGF5P12034 268 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 HOXD9P28356 352 aaPredicted RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 CHRNB4P30926 498 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 TNFSF10P50591 281 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 SELENOTP62341 195 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 BTG2P78543 158 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 ARF5P84085 180 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 ALKBH6Q3KRA9 238 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 AGTRAPQ6RW13 159 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 LHFPL4Q7Z7J7 247 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 RTN4RL1Q86UN2 441 aaPredicted RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 ZNF584Q8IVC4 421 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 BOD1L2Q8IYS8 172 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 OR2T27Q8NH04 317 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 EID2BQ96D98 161 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 MCHR1Q99705 422 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 OR11A1Q9GZK7 315 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 COMMD4Q9H0A8 199 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 ZCCHC3Q9NUD5 404 aaKnown RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 WSB2Q9NYS7 404 aaPredicted RBP7.1□□□□□ -1.27
VPS11-209ENST00000622309 MARCH2Q9P0N8 246 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 TMED7Q9Y3B3 224 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 ATP23Q9Y6H3 246 aa7.1□□□□□ -1.27
VPS11-209ENST00000622309 XKRYO14609 159 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SLC16A5O15375 505 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 PDGFBP01127 241 aaPredicted RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 APODP05090 189 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 CD1AP06126 327 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 GLIPR1P48060 266 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 NOVA1P51513 510 aaKnown RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 PMS2P11Q13670 270 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 AADACL3Q5VUY0 350 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 FAHD2BQ6P2I3 314 aaPredicted RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 GLB1LQ6UWU2 654 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 NUFIP2Q7Z417 695 aaKnown RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 LFNGQ8NES3 379 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 TVP23CQ96ET8 276 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 FAHD2AQ96GK7 314 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 ALKBH7Q9BT30 221 aaPredicted RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 SLC2A8Q9NY64 477 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 VAX2Q9UIW0 290 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SCN10AQ9Y5Y9 1956 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 TMEM265A0A087WTH1 108 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 PRAMEF27A3QJZ7 478 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 FCMRO60667 390 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 STK17BO94768 372 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 AHSA1O95433 338 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 HPRT1P00492 218 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 MPC1LP0DKB6 136 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SERPINA2P20848 420 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 CCKARP32238 428 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 CEACAM3P40198 252 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 ALDH3B1P43353 468 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SGSHP51688 502 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 SLC35A1P78382 337 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 FAM3AP98173 230 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms