RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TMIGD3P0DMS9 266 aaPredicted RBP6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC2A5P22732 501 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 LMO1P25800 156 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 GJA4P35212 333 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 RPL29P47914 159 aaKnown RBP6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 GLIPR1P48060 266 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 TAS2R31P59538 309 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 RANP62826 216 aaKnown RBP6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 GUCA2AQ02747 115 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 SHHQ15465 462 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 ZIC1Q15915 447 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 RPL7L1Q6DKI1 246 aaKnown RBP6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 TMEM64Q6YI46 380 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 NRMQ8IXM6 262 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 OR2A1Q8NGT9 310 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 ORAOV1Q8WV07 137 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 MOAP1Q96BY2 351 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 MS4A6EQ96DS6 147 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 BOD1Q96IK1 185 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 SNX22Q96L94 193 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 GNRHR2Q96P88 292 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 LMF1Q96S06 567 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 MED20Q9H944 212 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 CDH20Q9HBT6 801 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 MBNL1Q9NR56 388 aaKnown RBP6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 CMC2Q9NRP2 79 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 FOXJ2Q9P0K8 574 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF223Q9UK11 482 aaPredicted RBP6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 CES1P1Q9UKY3 287 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 CDV3Q9UKY7 258 aaKnown RBP6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 INSL6Q9Y581 213 aa6.71□□□□□ -1.33
TRIM49B-202ENST00000622138 MDC1Q14676 2089 aaKnown RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 TRPM6Q9BX84 2022 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 UNC80Q8N2C7 3258 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 TGIF2-C20orf24A0A0A6YYL0 155 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 EDDM13A0A1B0GTR0 161 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 TLCD2A6NGC4 264 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 DHRS7CA6NNS2 312 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 B4DEV8 164 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 H0YIZ8 118 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 CDC40O60508 579 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 MRPL3P09001 348 aaKnown RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ZGLP1P0C6A0 271 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 HIST1H1TP22492 207 aaPredicted RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 PEBP1P30086 187 aaKnown RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 CEACAM8P31997 349 aaPredicted RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 TAGLN2P37802 199 aaKnown RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ID4P47928 161 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 GABRA4P48169 554 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 RND2P52198 227 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 TRA2BP62995 288 aaKnown RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 IL13RA1P78552 427 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ENPP2Q13822 863 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ELAVL3Q14576 367 aaKnown RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ELOCQ15369 112 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 TMEM95Q3KNT9 176 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ALG10BQ5I7T1 473 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 STPG1Q5TH74 334 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF343Q6P1L6 599 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ABHD17CQ6PCB6 329 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 KIRREL2Q6UWL6 708 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 MBOAT2Q6ZWT7 520 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 GDF7Q7Z4P5 450 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF101Q8IZC7 436 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 SHISA5Q8N114 240 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 Q8NFD4 153 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 OR56B2PQ8NGI1 322 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 OR51F2Q8NH61 342 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 DOK4Q8TEW6 326 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 SMARCD2Q92925 531 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 TMEM18Q96B42 140 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ANKRD9Q96BM1 317 aaPredicted RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 C20orf144Q9BQM9 153 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 HCAR1Q9BXC0 346 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 CFHR5Q9BXR6 569 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 RNF208Q9H0X6 261 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 SLC26A1Q9H2B4 701 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 KIR3DX1Q9H7L2 352 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 Q9N2J8 555 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 APOBEC3BQ9UH17 382 aaKnown RBP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 RPH3ALQ9UNE2 315 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 OSGIN2Q9Y236 505 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 KCNK6Q9Y257 313 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 VSIG4Q9Y279 399 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF281Q9Y2X9 895 aa6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 PUS1Q9Y606 427 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRIM49B-202ENST00000622138 SCN3AQ9NY46 2000 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 A6NIZ1 184 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 BHLHE40O14503 412 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 PRICKLE3O43900 615 aaPredicted RBP6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 RAMP1O60894 148 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 ALOX12BO75342 701 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 UMODP07911 640 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 OR5H8P0DN80 308 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 LIPCP11150 499 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 TDGF1P13385 188 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 CCL5P13501 91 aa6.7□□□□□ -1.34
TRIM49B-202ENST00000622138 F3P13726 295 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms