RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	FGF14	Q92915	247 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	RAB3C	Q96E17	227 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	KPTN	Q9Y664	436 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	MPZL1	O95297	269 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	OR13C7	P0DN81	318 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	GALNTL5	Q7Z4T8	443 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	ZNF321P	Q8N8H1	164 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	C19orf47	Q8N9M1	422 aa	Known RBP	12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	TMEM104	Q8NE00	496 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	SAT2	Q96F10	170 aa	Predicted RBP	12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	SPACA5	Q96QH8	159 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	PRO1933	Q9H354	126 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	LRP12	Q9Y561	859 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	TIMM10B	Q9Y5J6	103 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	TNFRSF10C	O14798	259 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	GUSB	P08236	651 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	CTLA4	P16410	223 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	IL12B	P29460	328 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	FHIT	P49789	147 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	ACTBL2	Q562R1	376 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	HLA-DQA1	Q5Y7H0	255 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	LCN10	Q6JVE6	187 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	FIP1L1	Q6UN15	594 aa	Known RBP	12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	BTNL8	Q6UX41	500 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	ZDHHC22	Q8N966	263 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	OR13H1	Q8NG92	308 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	ZNF524	Q96C55	264 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	MARS2	Q96GW9	593 aa	Known RBP	12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	TBL1XR1	Q9BZK7	514 aa		12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	GDF2	Q9UK05	429 aa	Predicted RBP	12.83	□□□□□ -0.36
SYNRG-231	ENST00000622045	SDK1	Q7Z5N4	2213 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	HSPB2	A8KAH6	182 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	PPIH	O43447	177 aa	Known RBP	12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	VEGFB	P49765	207 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	FUT7	Q11130	342 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	HSPB2	Q16082	182 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	MIDN	Q504T8	468 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	TMEM240	Q5SV17	173 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	PRSS54	Q6PEW0	395 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	LINC00346	Q8IVM7	164 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	OR4K15	Q8NH41	348 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	COA3	Q9Y2R0	106 aa	Predicted RBP	12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	FBXO7	Q9Y3I1	522 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	FOXS1	O43638	330 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	HOXC4	P09017	264 aa	Predicted RBP	12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	GP1BB	P13224	206 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	S100A2	P29034	98 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	HTR5A	P47898	357 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	SULT1A1	P50225	295 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	RPL27	P61353	136 aa	Known RBP	12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	CYCS	P99999	105 aa	Known RBP	12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	GLO1	Q04760	184 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	DMRTC1	Q5HYR2	192 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	PRSS58	Q8IYP2	241 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	ZNF248	Q8NDW4	579 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	LIPH	Q8WWY8	451 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	NMES1	Q9C002	83 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	SLC5A7	Q9GZV3	580 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	CRISPLD2	Q9H0B8	497 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	UFSP2	Q9NUQ7	469 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	PUS1	Q9Y606	427 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	FREM3	P0C091	2139 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	LOC101059948	A0A1B0GTJ6	334 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	TMEM269	A0A1B0GVZ9	245 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	LOC107986453	A0A1B0GWG9	222 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045		A0A1W2PQF6	199 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	RAB27B	O00194	218 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	TNFRSF4	P43489	277 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	CX3CR1	P49238	355 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	PNLIPRP3	Q17RR3	467 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	ANKRD55	Q3KP44	614 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	CLEC18B	Q6UXF7	455 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	COX15	Q7KZN9	410 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	TREM2	Q9NZC2	230 aa		12.82	□□□□□ -0.36
SYNRG-231	ENST00000622045	UMAD1	C9J7I0	102 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	P2RY10	O00398	339 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	ST8SIA5	O15466	376 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	ZNF354A	O60765	605 aa	Predicted RBP	12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	C1QL1	O75973	258 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	CSNK1E	P49674	416 aa	Known RBP	12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	ZNF260	Q3ZCT1	412 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	MRPL22	Q9NWU5	206 aa	Known RBP	12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	TRAV36DV7	A0A075B6V5	113 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	CA3	P07451	260 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	CLDN6	P56747	220 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	ZP2	Q05996	745 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	EIF5AL1	Q6IS14	154 aa	Known RBP	12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	OR10D4P	Q8NGN7	298 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	MAFIP	Q8WZ33	124 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	SGK3	Q96BR1	496 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	KIF26B	Q2KJY2	2108 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	TRBV6-7	A0A0A0MS04	114 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	KIR2DS5	A0A0G2JLQ3	304 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045		A0A0G2JNG1	304 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	KIR2DS3	K7RE56	304 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	SDCBP	O00560	298 aa	Predicted RBP	12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	SLC34A2	O95436	690 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	SCGB1D2	O95969	90 aa		12.81	□□□□□ -0.36
SYNRG-231	ENST00000622045	RAB5C	P51148	216 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms