RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 HIKESHIQ53FT3 197 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 RNASE12Q5GAN4 147 aaKnown RBP18.69■□□□□ 0.58
SPAST-204ENST00000621856 TMEM69Q5SWH9 247 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 ZNF57Q68EA5 555 aaPredicted RBP18.69■□□□□ 0.58
SPAST-204ENST00000621856 DPPA2Q7Z7J5 298 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 BCL2L2Q92843 193 aaPredicted RBP18.69■□□□□ 0.58
SPAST-204ENST00000621856 THAP7Q9BT49 309 aaPredicted RBP18.69■□□□□ 0.58
SPAST-204ENST00000621856 METTL17Q9H7H0 456 aaPredicted RBP18.69■□□□□ 0.58
SPAST-204ENST00000621856 NOX3Q9HBY0 568 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 PIGLQ9Y2B2 252 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 RAXQ9Y2V3 346 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 DOCK7Q96N67 2140 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 RTTNQ86VV8 2226 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 TMEM272A0A1B0GTI8 110 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 ZNF503-AS2A6NEH8 195 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 COX5BP10606 129 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 ARSBP15848 533 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 PLP2Q04941 152 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 Q6ZSR3 168 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 OR6K3Q8NGY3 331 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 ZNF71Q9NQZ8 489 aaPredicted RBP18.68■□□□□ 0.58
SPAST-204ENST00000621856 DCHS1Q96JQ0 3298 aa18.68■□□□□ 0.58
SPAST-204ENST00000621856 TPOP07202 933 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 HCKP08631 526 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 FAHP16930 419 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 CCNOP22674 350 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 CDK2P24941 298 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 KIR2DL2P43627 348 aaPredicted RBP18.67■□□□□ 0.58
SPAST-204ENST00000621856 MMP15P51511 669 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 PER3P56645 1201 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 LYPD6Q86Y78 171 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 OR5AS1Q8N127 324 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 OR4D6Q8NGJ1 314 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 UQCC2Q9BRT2 126 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 SLC22A4Q9H015 551 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 CNTD2Q9H8S5 307 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 CFAP47Q6ZTR5 3102 aa18.67■□□□□ 0.58
SPAST-204ENST00000621856 SSX4O60224 188 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 TMIGD3P0DMS9 266 aaPredicted RBP18.66■□□□□ 0.58
SPAST-204ENST00000621856 GABRA1P14867 456 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 STOMP27105 288 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 ZNF93P35789 620 aaPredicted RBP18.66■□□□□ 0.58
SPAST-204ENST00000621856 EFNB2P52799 333 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 TGFBR3Q03167 851 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 TBRG1Q3YBR2 411 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 KRTCAP3Q53RY4 240 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 VWA1Q6PCB0 445 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 SEMA6DQ8NFY4 1073 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 PP6455Q8WZ26 134 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 PHF21AQ96BD5 680 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 C10orf35Q96D05 121 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 C11orf54Q9H0W9 315 aaPredicted RBP18.66■□□□□ 0.58
SPAST-204ENST00000621856 TBCCD1Q9NVR7 557 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 B3GNT2Q9NY97 397 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 ZNF391Q9UJN7 358 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 GTF3C1Q12789 2109 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 LOC100509620A0A075B734 347 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 C5orf49A4QMS7 147 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 CTDSPLO15194 276 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 PLA2G10O15496 165 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 PFDN1O60925 122 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 IGHV1-2P23083 117 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 CAPZA1P52907 286 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 DGCR2P98153 550 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 CCBE1Q6UXH8 406 aaPredicted RBP18.66■□□□□ 0.58
SPAST-204ENST00000621856 NRARPQ7Z6K4 114 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 SPACA5Q96QH8 159 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 C1QTNF5Q9BXJ0 243 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 RGCCQ9H4X1 137 aa18.66■□□□□ 0.58
SPAST-204ENST00000621856 CIB4A0PJX0 185 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 XRCC2O43543 280 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 LANCL1O43813 399 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 TAS2R20P59543 309 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 CXADRP78310 365 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 GSG1Q2KHT4 349 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 Q6ZT83 130 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 AKAP1Q92667 903 aaKnown RBP eCLIP18.65■□□□□ 0.58
SPAST-204ENST00000621856 TRIM63Q969Q1 353 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 ATG5Q9H1Y0 275 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 DIABLOQ9NR28 239 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 RHBDD3Q9Y3P4 386 aa18.65■□□□□ 0.58
SPAST-204ENST00000621856 MBD3L4A6NDZ8 208 aaPredicted RBP18.64■□□□□ 0.57
SPAST-204ENST00000621856 MBD3L3A6NE82 208 aaPredicted RBP18.64■□□□□ 0.57
SPAST-204ENST00000621856 MBD3L5A6NJ08 208 aaPredicted RBP18.64■□□□□ 0.57
SPAST-204ENST00000621856 DHRS7CA6NNS2 312 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 GSTZ1O43708 216 aaPredicted RBP18.64■□□□□ 0.57
SPAST-204ENST00000621856 WDR1O75083 606 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 CTAG2O75638 210 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 ALDOBP05062 364 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 CD3GP09693 182 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 CCL2P13500 99 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 MAP2K3P46734 347 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 RFX2P48378 723 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 RIPPLY1Q0D2K3 151 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 FOXF2Q12947 444 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 C1orf185Q5T7R7 199 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 HACD4Q5VWC8 232 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 MZT2BQ6NZ67 158 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 UTS2BQ765I0 119 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 CD163Q86VB7 1156 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms