RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 KIR2DL3P43628 341 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 PITPNBP48739 271 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 YIF1BQ5BJH7 314 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 SLC25A47Q6Q0C1 308 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 GDPGP1Q6ZNW5 385 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 PRR18Q8N4B5 295 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 SLCO5A1Q9H2Y9 848 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 C12orf10Q9HB07 376 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 INPP5EQ9NRR6 644 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 NME2P1O60361 137 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 FARS2O95363 451 aaKnown RBP9.21□□□□□ -0.93
VPS11-208ENST00000621676 PMS2P2O95744 297 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 NME2P22392 152 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 ADH6P28332 368 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 LCN1P31025 176 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 THBS2P35442 1172 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 MTNR1BP49286 362 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 ZNF92Q03936 586 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 TAF9Q16594 264 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 ZNF684Q5T5D7 378 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 OR2T2Q6IF00 324 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 LIN54Q6MZP7 749 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 CD200R1LQ6Q8B3 271 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 ZCCHC24Q8N2G6 241 aaKnown RBP9.21□□□□□ -0.93
VPS11-208ENST00000621676 GJC3Q8NFK1 279 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 OR56B4Q8NH76 319 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 RNF133Q8WVZ7 376 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 CPNE4Q96A23 557 aaPredicted RBP9.21□□□□□ -0.93
VPS11-208ENST00000621676 ST6GALNAC5Q9BVH7 336 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 PTTG3PQ9NZH4 202 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 RHBDD3Q9Y3P4 386 aa9.21□□□□□ -0.93
VPS11-208ENST00000621676 SULT1C4O75897 302 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 IFI6P09912 130 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 ZNF93P35789 620 aaPredicted RBP9.21□□□□□ -0.94
VPS11-208ENST00000621676 ZNF45Q02386 682 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 CLPPQ16740 277 aaPredicted RBP9.21□□□□□ -0.94
VPS11-208ENST00000621676 GLIPR1L1Q6UWM5 242 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 BIVMQ86UB2 503 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 SETD6Q8TBK2 473 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 FYTTD1Q96QD9 318 aaKnown RBP9.21□□□□□ -0.94
VPS11-208ENST00000621676 S100A13Q99584 98 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 PRR13Q9NZ81 148 aa9.21□□□□□ -0.94
VPS11-208ENST00000621676 IGSF10Q6WRI0 2623 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 SDCBPO00560 298 aaPredicted RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 HTR3BO95264 441 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 MTCP1P56278 107 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 GGTLC2Q14390 218 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 RSPO1Q2MKA7 263 aaPredicted RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 MOB3CQ70IA8 216 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 CATSPERDQ86XM0 798 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 TMEM123Q8N131 208 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 TEX19Q8NA77 164 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 C9orf106Q8NAJ2 232 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 TNFAIP8L1Q8WVP5 186 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 HAS2Q92819 552 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 S100A16Q96FQ6 103 aaKnown RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 NIPAL2Q9H841 368 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 SLC33A1O00400 549 aaPredicted RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 GPR171O14626 319 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 HTR2CP28335 458 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 OPRM1P35372 400 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 EGR3Q06889 387 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 RAB11BQ15907 218 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 PCGF3Q3KNV8 242 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 FAM109AQ8N4B1 249 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 SLC25A38Q96DW6 304 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 HDHD3Q9BSH5 251 aaPredicted RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 CELSR1Q9NYQ6 3014 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 A0A087WZY1 265 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 ZNF850A8MQ14 1090 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 LYRM1O43325 122 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 ATP6V1G1O75348 118 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 ZNF432O94892 652 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 GDNFP39905 211 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 MAP2K3P46734 347 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 MAP2K6P52564 334 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 ART1P52961 327 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 SNRPD2P62316 118 aaKnown RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 SNTB2Q13425 540 aaKnown RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 ELFN2Q5R3F8 820 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 PDSS1Q5T2R2 415 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 H3F3CQ6NXT2 135 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 LRRTM1Q86UE6 522 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 DND1Q8IYX4 353 aaKnown RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 C17orf78Q8N4C9 275 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 ZNF610Q8N9Z0 462 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 MDS2Q8NDY4 140 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 OR10AD1Q8NGE0 317 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 NEK7Q8TDX7 302 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 REEP6Q96HR9 211 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 FRMD6Q96NE9 622 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 GPHA2Q96T91 129 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 ESRP2Q9H6T0 727 aaKnown RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 ZNF701Q9NV72 531 aaPredicted RBP9.2□□□□□ -0.94
VPS11-208ENST00000621676 ASF1BQ9NVP2 202 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 FAM206AQ9NX38 181 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 STARD10Q9Y365 291 aa9.2□□□□□ -0.94
VPS11-208ENST00000621676 TRAV17A0A0B4J275 112 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 TRIM64BA6NI03 449 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms