RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 FAM3AP98173 230 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 ALKBH1Q13686 389 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 FDX2Q6P4F2 183 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 TMPRSS11AQ6ZMR5 421 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 Q6ZR03 302 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 PGAP1Q75T13 922 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 RDH10Q8IZV5 341 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 BHLHE23Q8NDY6 225 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 OR52H1Q8NGJ2 320 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 OR52N1Q8NH53 320 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 SPSB4Q96A44 273 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 MRPL48Q96GC5 212 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 FAM71F1Q96KD3 344 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 COG8Q96MW5 612 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 CCL19Q99731 98 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 CDCA4Q9BXL8 241 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 CACNG6Q9BXT2 260 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 TPK1Q9H3S4 243 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 PPP1R3EQ9H7J1 279 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 SP140LQ9H930 580 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 MSL2Q9HCI7 577 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 GPR84Q9NQS5 396 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 FAIMQ9NVQ4 179 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 ST6GALNAC2Q9UJ37 374 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 LSM2Q9Y333 95 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 TANC2Q9HCD6 1990 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 NBPF19A0A087WUL8 3843 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 GGT3PA6NGU5 568 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 ZSCAN5BA6NJL1 495 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 OR4C45A6NMZ5 311 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 CD300LBA8K4G0 201 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 VSTM5A8MXK1 200 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 H0YL77 283 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 H3BSA7 217 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 OVOL3O00110 214 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 NDUFS7O75251 213 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 RAF1P04049 648 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 TUBG1P23258 451 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 ACKR3P25106 362 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 EVX1P49640 407 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 GSK3AP49840 483 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 MMP15P51511 669 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 GBX2P52951 348 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 WNT4P56705 351 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 GABARAPL2P60520 117 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 SNRPD2P62316 118 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 HNRNPA0Q13151 305 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 NKPD1Q17RQ9 610 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 SPRNQ5BIV9 151 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 RNLSQ5VYX0 342 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 PRSS48Q7RTY5 328 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 COMMD2Q86X83 199 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 C1orf174Q8IYL3 243 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 OR56B2PQ8NGI1 322 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 OR10AC1Q8NH08 325 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 DVL3Q92997 716 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 YTHDF1Q9BYJ9 559 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 MOB1AQ9H8S9 216 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 TUBG2Q9NRH3 451 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 BABAM2Q9NXR7 383 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 BLOC1S6Q9UL45 172 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 ERGIC3Q9Y282 383 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 LRCH1Q9Y2L9 728 aa9.33□□□□□ -0.92
POLR2J3-221ENST00000621093 DYSFO75923 2080 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 CENPEQ02224 2701 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 A0A0U1RQV5 110 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 PNMA8CA0A1B0GUJ8 204 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 A6NIN4 97 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 IQCF6A8MYZ5 107 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 M0R233 179 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 OGG1O15527 345 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 SPRY3O43610 288 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 RBMXP38159 391 aaKnown RBP9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 MAGEB1P43366 347 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 TGM4P49221 684 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 CHN2P52757 468 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 SELENOVP59797 346 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 CDK5R1Q15078 307 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 OR14K1Q8NGZ2 314 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 RPS4Y2Q8TD47 263 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 SORCS2Q96PQ0 1159 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 VRK1Q99986 396 aaPredicted RBP9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 PDCD1LG2Q9BQ51 273 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 MND1Q9BWT6 205 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 DYNLRB1Q9NP97 96 aa9.32□□□□□ -0.92
POLR2J3-221ENST00000621093 APCP25054 2843 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 TRBV2A0A0J9YWF9 115 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 LOC107986453A0A1B0GWG9 222 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 TRIM64A6NGJ6 449 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 MLNRO43193 412 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 LY6HO94772 140 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 ZFPL1O95159 310 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 IGHV1-46P01743 117 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 HLA-DPB1P04440 258 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 PPOXP50336 477 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 ZNF81P51508 661 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 CCR9P51686 369 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 EMX1Q04741 257 aaPredicted RBP9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 SLC3A1Q07837 685 aa9.31□□□□□ -0.92
POLR2J3-221ENST00000621093 SPHARQ15513 63 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms