RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 QDPRP09417 244 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 ZNF20P17024 532 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 AKR1C4P17516 323 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 SRSF4Q08170 494 aaKnown RBP17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 OR2AJ1Q8NGZ0 328 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 IFT46Q9NQC8 304 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 PFDN2Q9UHV9 154 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 IGLV3-32A0A0A0MS00 114 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 RNF222A6NCQ9 220 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 EFSO43281 561 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 RAD51DO75771 328 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 DKK1O94907 266 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 MPIG6BO95866 241 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 CASRP41180 1078 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 GABREP78334 506 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 BTN1A1Q13410 526 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 C11orf87Q6NUJ2 197 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 PDZD9Q8IXQ8 264 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 BVESQ8NE79 360 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 CCDC74BQ96LY2 380 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 OCIAD1Q9NX40 245 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 TNFSF18Q9UNG2 199 aa17.02■□□□□ 0.32
PCDHGB3-202ENST00000618934 COL6A3P12111 3177 aa17.02■□□□□ 0.31
PCDHGB3-202ENST00000618934 TRIM77I1YAP6 450 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 SIGLEC6O43699 453 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 MSX1P28360 303 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 TMEM50BP56557 158 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 IL13RA1P78552 427 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 FAM57BQ71RH2 274 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 KCTD9Q7L273 389 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 MARCH1Q8TCQ1 289 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 MUC3AQ02505 3323 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 TOX3O15405 576 aaPredicted RBP17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 IL2RAP01589 272 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 VAMP1P23763 118 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 MITD1Q8WV92 249 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 ASB13Q8WXK3 278 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 VRK1Q99986 396 aaPredicted RBP17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 SHARPINQ9H0F6 387 aa17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 MRPS28Q9Y2Q9 187 aaKnown RBP17.01■□□□□ 0.31
PCDHGB3-202ENST00000618934 IGKV1-9A0A0C4DH69 117 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 MGMTP16455 207 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 LUMP51884 338 aaPredicted RBP17■□□□□ 0.31
PCDHGB3-202ENST00000618934 MICBQ29980 383 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 OVCH2Q7RTZ1 564 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 KCNRGQ8N5I3 272 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 SPACA9Q96E40 222 aaPredicted RBP17■□□□□ 0.31
PCDHGB3-202ENST00000618934 TRIOBPQ9H2D6 2365 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 MPZP25189 248 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 CX3CR1P49238 355 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 ZBTB44Q8NCP5 570 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 OR6X1Q8NH79 312 aa17■□□□□ 0.31
PCDHGB3-202ENST00000618934 LIN37Q96GY3 246 aaPredicted RBP17■□□□□ 0.31
PCDHGB3-202ENST00000618934 GPN3Q9UHW5 284 aaPredicted RBP17■□□□□ 0.31
PCDHGB3-202ENST00000618934 EEF1E1-BLOC1S5C9J1V9 151 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 TSPAN4O14817 238 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 ZNF43P17038 809 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 ATF4P18848 351 aaPredicted RBP16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 HIST3H3Q16695 136 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 PHYHD1Q5SRE7 291 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 C1QL2Q7Z5L3 287 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 ZDHHC22Q8N966 263 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 OR4K15Q8NH41 348 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 TMEM41AQ96HV5 264 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 OXGR1Q96P68 337 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 DEFB126Q9BYW3 111 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 PPA2Q9H2U2 334 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 PRR13Q9NZ81 148 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 PISDQ9UG56 409 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 CHCHD2Q9Y6H1 151 aaPredicted RBP16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 CDC14BO60729 498 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 CRIP3Q6Q6R5 217 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 OR5D18Q8NGL1 313 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 NPRL2Q8WTW4 380 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 MRPS24Q96EL2 167 aaKnown RBP16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 ZNF416Q9BWM5 594 aa16.99■□□□□ 0.31
PCDHGB3-202ENST00000618934 IGHV3-15A0A0B4J1V0 119 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 A0A0D9SG52 128 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 D6RAR5 112 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 MASP2O00187 686 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 SLC25A4P12235 298 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 EPHA8P29322 1005 aaPredicted RBP16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 AGTR1P30556 359 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 CLDN17P56750 224 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 SGCAQ16586 387 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 TMPPEQ6ZT21 453 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 ADPRHL1Q8NDY3 354 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 OR4K17Q8NGC6 315 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 LYZL4Q96KX0 146 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 FBLN5Q9UBX5 448 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 HCKP08631 526 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 HLA-GP17693 338 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 PI3P19957 117 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 DLSTP36957 453 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 CXCL12P48061 93 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 FGL1Q08830 312 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 ATRAIDQ6UW56 229 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 ZNF283Q8N7M2 679 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 FADS6Q8N9I5 356 aa16.98■□□□□ 0.31
PCDHGB3-202ENST00000618934 DTWD2Q8NBA8 298 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms