RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF355PQ9NSJ1 428 aa13.72□□□□□ -0.21
COL5A1-208ENST00000618395 MBD1Q9UIS9 605 aaPredicted RBP13.72□□□□□ -0.21
COL5A1-208ENST00000618395 COX7A2P2O60397 106 aa13.72□□□□□ -0.21
COL5A1-208ENST00000618395 IL3RAP26951 378 aa13.72□□□□□ -0.21
COL5A1-208ENST00000618395 ST6GAL2Q96JF0 529 aa13.72□□□□□ -0.21
COL5A1-208ENST00000618395 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
COL5A1-208ENST00000618395 LSM2Q9Y333 95 aaKnown RBP13.72□□□□□ -0.21
COL5A1-208ENST00000618395 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-208ENST00000618395 Q6ZVL8 140 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 C1QTNF3Q9BXJ4 246 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 MS4A7Q9GZW8 240 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-208ENST00000618395 POLR2AP24928 1970 aaKnown RBP13.71□□□□□ -0.21
COL5A1-208ENST00000618395 NPIPB15A6NHN6 443 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-208ENST00000618395 PMCHL1Q16048 86 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 TMEM65Q6PI78 240 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 MROH1Q8NDA8 1641 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 OR2W5A6NFC9 320 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 P2RY10O00398 339 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 COX6CP09669 75 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 HTR5AP47898 357 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 TIAL1Q01085 375 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL5A1-208ENST00000618395 HES3Q5TGS1 186 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 ZDHHC22Q8N966 263 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 RCL1Q9Y2P8 373 aaKnown RBP13.71□□□□□ -0.21
COL5A1-208ENST00000618395 AMDHD2Q9Y303 409 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 NIT1Q86X76 327 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 TMEM229BQ8NBD8 167 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 FAM71CQ8NEG0 241 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 SH3RF2Q8TEC5 729 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 GGACTQ9BVM4 153 aa13.71□□□□□ -0.21
COL5A1-208ENST00000618395 M0R3E3 92 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 PMP22Q01453 160 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 VWA2Q5GFL6 755 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 ADAMTS17Q8TE56 1095 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 DMRTA2Q96SC8 542 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.22
COL5A1-208ENST00000618395 ALKBH7Q9BT30 221 aaPredicted RBP13.71□□□□□ -0.22
COL5A1-208ENST00000618395 CYSLTR2Q9NS75 346 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 PEF1Q9UBV8 284 aaKnown RBP13.71□□□□□ -0.22
COL5A1-208ENST00000618395 XRCC2O43543 280 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 TMIGD3P0DMS9 266 aaPredicted RBP13.71□□□□□ -0.22
COL5A1-208ENST00000618395 IL1RNP18510 177 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 PLXDC2Q6UX71 529 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 ZC3H3Q8IXZ2 948 aaKnown RBP13.71□□□□□ -0.22
COL5A1-208ENST00000618395 OPALINQ96PE5 141 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 BANF2Q9H503 90 aa13.71□□□□□ -0.22
COL5A1-208ENST00000618395 CXorf65A6NEN9 183 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 OR5B21A6NL26 309 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 NXPH2O95156 264 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 FAHD2BQ6P2I3 314 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-208ENST00000618395 TMEM136Q6ZRR5 245 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 C9orf62Q8N4C0 152 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 FAHD2AQ96GK7 314 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 B3GAT1Q9P2W7 334 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 TRAV1-2A0A0B4J238 106 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 TMEM38AQ9H6F2 299 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 KLK11Q9UBX7 282 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 USP22Q9UPT9 525 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 GLI4P10075 376 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 BSXQ3C1V8 233 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 ZNF776Q68DI1 518 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-208ENST00000618395 OR1L6Q8NGR2 347 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 DOK4Q8TEW6 326 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 PRSS50Q9UI38 385 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 AHCTF1Q8WYP5 2266 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 TMEM265A0A087WTH1 108 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 HNRNPA1P09651 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL5A1-208ENST00000618395 SNHG28P0DPA3 235 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 RTL8BQ17RB0 113 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 HNRNPA1L2Q32P51 320 aaKnown RBP13.7□□□□□ -0.22
COL5A1-208ENST00000618395 ELFN2Q5R3F8 820 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 ELF5Q9UKW6 265 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-208ENST00000618395 SPATA31D1Q6ZQQ2 1576 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 IGLV3-22A0A075B6J6 115 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 UQCRFS1P47985 274 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 TMEM116Q8NCL8 245 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 TEX101Q9BY14 249 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 TRBV23-1A0A0A0MS06 115 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 CRXO43186 299 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-208ENST00000618395 SELENOFO60613 162 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 RECKO95980 971 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 CAMPP49913 170 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 CASP7P55210 303 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 TPGS2Q68CL5 300 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 SRD5A3Q9H8P0 318 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 A4GALTQ9NPC4 353 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 NDUFB6O95139 128 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 RAB32Q13637 225 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 MDGA1Q8NFP4 955 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 VDAC3Q9Y277 283 aa13.7□□□□□ -0.22
COL5A1-208ENST00000618395 ZNF541Q9H0D2 1346 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 SIGLEC5O15389 551 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 TEAD1P28347 426 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 TXNDC8Q6A555 127 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-208ENST00000618395 OVCH2Q7RTZ1 564 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 RASL12Q9NYN1 266 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 CFIP05156 583 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms