RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FAM71AQ8IYT1 594 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 TBC1D19Q8N5T2 526 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 CDRT4Q8N9R6 151 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 DUSP18Q8NEJ0 188 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 OR52E5Q8NH55 327 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 LGALS14Q8TCE9 139 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 RNF133Q8WVZ7 376 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 FAM104AQ969W3 186 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 DNAJC19Q96DA6 116 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 RNF170Q96K19 258 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 PRAP1Q96NZ9 151 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 RSG1Q9BU20 258 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 UGT1A10Q9HAW8 530 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 SLCO1B3Q9NPD5 702 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 CTPS2Q9NRF8 586 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 GPATCH2LQ9NWQ4 482 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 MAT2BQ9NZL9 334 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 NXT1Q9UKK6 140 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 ZNF337Q9Y3M9 751 aa2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 EIF3AQ14152 1382 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-213ENST00000609587 IGKV1D-13A0A0B4J2D9 117 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 E5RI56 91 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 M0QXV9 152 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 XKRYO14609 159 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 NDUFA2O43678 99 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 ICOSLGO75144 302 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 SS18L1O75177 396 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 ENTPD5O75356 428 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 ADAP1O75689 374 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 IGHV3-43DP0DP04 118 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 IGKV1-13P0DP09 117 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 TNNI1P19237 187 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 RAB4AP20338 218 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 HLA-DMAP28067 261 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 OR1E1P30953 314 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 KDELR2P33947 212 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 RAB10P61026 200 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 ATP6V0D1P61421 351 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 VSNL1P62760 191 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 PITPNAQ00169 270 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 BNIP2Q12982 314 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 NAB1Q13506 487 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 NDUFAF6Q330K2 333 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 YIF1BQ5BJH7 314 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 TMEM255AQ5JRV8 349 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 KHDRBS2Q5VWX1 349 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 DUPD1Q68J44 220 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 REEP3Q6NUK4 255 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 PRMT9Q6P2P2 845 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 H2AFVQ71UI9 128 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 BOD1L2Q8IYS8 172 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 OR10Z1Q8NGY1 313 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 ACTRT1Q8TDG2 376 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 DTD1Q8TEA8 209 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 GEMIN6Q8WXD5 167 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 FAM131CQ96AQ9 280 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 AURKBQ96GD4 344 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 PACRGQ96M98 296 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 SERPINB11Q96P15 392 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 PRRT1Q99946 306 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 ZNF426Q9BUY5 554 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 CDC42EP4Q9H3Q1 356 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 KIR3DX1Q9H7L2 352 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 UGT1A7Q9HAW7 530 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 UGT1A8Q9HAW9 530 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 INPP5EQ9NRR6 644 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 TAS2R9Q9NYW1 312 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 ZNF282Q9UDV7 671 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 KLK12Q9UKR0 248 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 NUP50Q9UKX7 468 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 SLC22A13Q9Y226 551 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 AP3M1Q9Y2T2 418 aa2.73□□□□□ -1.97
SMCHD1-213ENST00000609587 ELP1O95163 1332 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 IGLV3-16A0A075B6K0 115 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 A0A1B0GVI7 797 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 A0A1W2PQL4 384 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 ZNF726A6NNF4 738 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 PPP1R2P9O14990 202 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 AQP9O43315 295 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 XRCC2O43543 280 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 AIREO43918 545 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 HUS1O60921 280 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 FCN3O75636 299 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 TSPAN13O95857 204 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 BGLAPP02818 100 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 PGAM1P18669 254 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 GTF2E2P29084 291 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 ALDH3A1P30838 453 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 COILP38432 576 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 CXCL5P42830 114 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 SLC1A2P43004 574 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 MAGEA6P43360 314 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 TFPI2P48307 235 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 RORCP51449 518 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 HERVK_113P61574 105 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 CCL7P80098 99 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 ZNF92Q03936 586 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 IFFO1Q0D2I5 559 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 SELENBP1Q13228 472 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 GGTLC2Q14390 218 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms