RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 ZFP41Q8N8Y5 198 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 EXD3Q8N9H8 876 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 AGBL5Q8NDL9 886 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 RCBTB1Q8NDN9 531 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 ZNF248Q8NDW4 579 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 OR2T33Q8NG76 320 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 OR10AD1Q8NGE0 317 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 OR14K1Q8NGZ2 314 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 LGALS14Q8TCE9 139 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 NEK7Q8TDX7 302 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 MITD1Q8WV92 249 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 PPP1R1CQ8WVI7 109 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 MAL2Q969L2 176 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 SLC25A28Q96A46 364 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 ESAMQ96AP7 390 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 RAB39BQ96DA2 213 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 SMIM19Q96E16 107 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 NUS1Q96E22 293 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 NEURL3Q96EH8 262 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 DTD2Q96FN9 168 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 LIN37Q96GY3 246 aaPredicted RBP4.55□□□□□ -1.68
SSX9-202ENST00000608568 PACRGQ96M98 296 aaPredicted RBP4.55□□□□□ -1.68
SSX9-202ENST00000608568 ZNF75AQ96N20 296 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 SLC46A1Q96NT5 459 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 FANCD2OSQ96PS1 177 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 OR14A2Q96R54 314 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 LMF1Q96S06 567 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 PKP4Q99569 1192 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 PHB2Q99623 299 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 PRRT1Q99946 306 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 SEMA3CQ99985 751 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 DUSP23Q9BVJ7 150 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 SLC12A9Q9BXP2 914 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 ANGPTL4Q9BY76 406 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 ACTRT3Q9BYD9 372 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 OR8D2Q9GZM6 311 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 SLC35B3Q9H1N7 401 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 WDR13Q9H1Z4 485 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 OR51B6Q9H340 312 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 FN3KRPQ9HA64 309 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 BCL2L10Q9HD36 194 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 MYNNQ9NPC7 610 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 LHX9Q9NQ69 397 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 PRR13Q9NZ81 148 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 PRODH2Q9UF12 536 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 VAX2Q9UIW0 290 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 DKKL1Q9UK85 242 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 A4GNTQ9UNA3 340 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 HDGFL3Q9Y3E1 203 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 STRAPQ9Y3F4 350 aaKnown RBP4.55□□□□□ -1.68
SSX9-202ENST00000608568 V9GY05 133 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 MYO9AB2RTY4 2548 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 CSMD1Q96PZ7 3565 aa4.55□□□□□ -1.68
SSX9-202ENST00000608568 TRBV5-4A0A0C4DH59 114 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 A0A1W2PPH5 198 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 HSPB2A8KAH6 182 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 C9orf172C9J069 976 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 M0R036 132 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 FOXE1O00358 373 aaPredicted RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 RTCAO00442 366 aaKnown RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 CYR61O00622 381 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 RRP8O43159 456 aaKnown RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 YIF1AO95070 293 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 CST4P01036 141 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 TK1P04183 234 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 SNRNP70P08621 437 aaKnown RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 ANXA4P09525 319 aaPredicted RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 RD3LP0DJH9 198 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 CCL4P13236 92 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 SRMP19623 302 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 TBPP20226 339 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 TNFRSF1BP20333 461 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 CHATP28329 748 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 SERPINA4P29622 427 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 IL2RGP31785 369 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 BMI1P35226 326 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 RPS10P46783 165 aaKnown RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 CSNK1DP48730 415 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 DUSP3P51452 185 aaPredicted RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 KLF3P57682 345 aaPredicted RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 TMPRSS3P57727 454 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 ARF6P62330 175 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 YPEL5P62699 121 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 HBA1P69905 142 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 CDK3Q00526 305 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 B4GALNT1Q00973 533 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 RBM39Q14498 530 aaKnown RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 CLINT1Q14677 625 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 MELKQ14680 651 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 CDK5R1Q15078 307 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 RAB35Q15286 201 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 TAF13Q15543 124 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 HSPB2Q16082 182 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 DECR1Q16698 335 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 PRSS53Q2L4Q9 553 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 PCGF3Q3KNV8 242 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 ZNF791Q3KP31 576 aaPredicted RBP4.54□□□□□ -1.68
SSX9-202ENST00000608568 SCGB2B2Q4G0G5 96 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 AKIRIN2Q53H80 203 aa4.54□□□□□ -1.68
SSX9-202ENST00000608568 KHDC3LQ587J8 217 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms