RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 CFL1P23528 166 aaKnown RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 GGT2P36268 569 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 OR1E2P47887 323 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 CENPAP49450 140 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 GZMMP51124 257 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 SMIM11AP58511 58 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 ARF6P62330 175 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 EMX1Q04741 257 aaPredicted RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 SRSF4Q08170 494 aaKnown RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 MAB21L1Q13394 359 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 SELPLGQ14242 412 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 GK2Q14410 553 aaPredicted RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 KRT72Q14CN4 511 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 IFI44LQ53G44 452 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 CCDC92Q53HC0 331 aaPredicted RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 LRRC10Q5BKY1 277 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 MESTQ5EB52 335 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 CLEC12AQ5QGZ9 265 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 RUSC1-AS1Q66K80 236 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 CGB2Q6NT52 195 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 PGBD2Q6P3X8 592 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 LYPD2Q6UXB3 125 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 Q6ZSV7 163 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 FKBP9P1Q75LS8 142 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 BTN2A1Q7KYR7 527 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 FAM122BQ7Z309 247 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 TSEN54Q7Z6J9 526 aaKnown RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 OR13C2Q8NGS9 318 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 SLCO4A1Q96BD0 722 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 TPD52L3Q96J77 140 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 Q96M85 177 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 PITX2Q99697 317 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 ATF6BQ99941 703 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 ADAT1Q9BUB4 502 aaKnown RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 NUAK2Q9H093 628 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 SIRPDQ9H106 197 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 POFUT1Q9H488 388 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 ABCB9Q9NP78 766 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 UFSP2Q9NUQ7 469 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 ZNRD1Q9P1U0 126 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 RPUSD1Q9UJJ7 312 aaKnown RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 A4GNTQ9UNA3 340 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 COA3Q9Y2R0 106 aaPredicted RBP5.2□□□□□ -1.58
CUX1-220ENST00000607092 ADAM18Q9Y3Q7 739 aa5.2□□□□□ -1.58
CUX1-220ENST00000607092 A0A087WUU8 490 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 A0A0U1RQK1 487 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 hCG_1809904A0A1W2PP81 198 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 A0A1W2PPE2 198 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 A0A1W2PPH5 198 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 A0A1W2PR64 198 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 hCG_1807616A0A1W2PRN6 198 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 A0A1W2PRQ8 180 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 A0A1W2PRV1 198 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 A6NLC8 198 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ANKRD30BLA7E2S9 258 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 CD300LBA8K4G0 201 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 H0YL77 283 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 H7C1C5 153 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 BHLHE40O14503 412 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 DVL1O14640 695 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ARPC3O15145 178 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 GSTA4O15217 222 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 SLC22A2O15244 555 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 NDUFB3O43676 98 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 GMNNO75496 209 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 GLCEO94923 617 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 PPP1R3DO95685 299 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 TSPAN15O95858 294 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 HLA-DPB1P04440 258 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ALDOBP05062 364 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 DBHP09172 617 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ACSM4P0C7M7 580 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ZNF823P16415 610 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 FAHP16930 419 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 TNFRSF1BP20333 461 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 CA6P23280 308 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 NOS3P29474 1203 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 SLC6A6P31641 620 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 IFNGR2P38484 337 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 KIR2DS4P43632 304 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 SLC15A1P46059 708 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 GSK3BP49841 420 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 ERFP50548 548 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 MNAT1P51948 309 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 UBE2E1P51965 193 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 SLC7A2P52569 658 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 CRYBA2P53672 197 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 LOXL3P58215 753 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 LCN6P62502 163 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 TRAP1Q12931 704 aaKnown RBP5.19□□□□□ -1.58
CUX1-220ENST00000607092 RIPK1Q13546 671 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 DCTN2Q13561 401 aaKnown RBP5.19□□□□□ -1.58
CUX1-220ENST00000607092 DGCR6Q14129 220 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 BEAN1Q3B7T3 259 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 RABL3Q5HYI8 236 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 TEX36Q5VZQ5 186 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 HIST2H2BDQ6DRA6 164 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 SMARCD3Q6STE5 483 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 DRAM2Q6UX65 266 aa5.19□□□□□ -1.58
CUX1-220ENST00000607092 CYB561A3Q8NBI2 242 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms