RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 STARD4Q96DR4 205 aa18.77■□□□□ 0.6
USP6NL-204ENST00000606752 REEP6Q96HR9 211 aa18.77■□□□□ 0.6
USP6NL-204ENST00000606752 RGCCQ9H4X1 137 aa18.77■□□□□ 0.6
USP6NL-204ENST00000606752 ERCC1P07992 297 aaPredicted RBP18.77■□□□□ 0.59
USP6NL-204ENST00000606752 TMIGD3P0DMS9 266 aaPredicted RBP18.77■□□□□ 0.59
USP6NL-204ENST00000606752 TIMP3P35625 211 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 PITPNBP48739 271 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 GSG1Q2KHT4 349 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 C1orf100Q5SVJ3 147 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 GLYATL3Q5SZD4 288 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 UNQ6494/PRO21346Q6UXR6 183 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 COLCA1Q6ZS62 124 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 LYPD6Q86Y78 171 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 OR13C9Q8NGT0 318 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 CHPT1Q8WUD6 406 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 SNRNP40Q96DI7 357 aaKnown RBP18.77■□□□□ 0.59
USP6NL-204ENST00000606752 ZFP3Q96NJ6 502 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 SLX1AQ9BQ83 275 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 ABCG5Q9H222 651 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 PROCRQ9UNN8 238 aa18.77■□□□□ 0.59
USP6NL-204ENST00000606752 A0A1B0GVG6 124 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 CIB4A0PJX0 185 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 SULT1B1O43704 296 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 CGAP01215 116 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 IL2RAP01589 272 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 HTR2CP28335 458 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 CMTM4Q8IZR5 234 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 JAGN1Q8N5M9 183 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 OR51D1Q8NGF3 324 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 OR6M1Q8NGM8 313 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 RAB40AQ8WXH6 277 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 SLC25A28Q96A46 364 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 FAM3DQ96BQ1 224 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 SLC25A38Q96DW6 304 aa18.76■□□□□ 0.59
USP6NL-204ENST00000606752 CGGBP1Q9UFW8 167 aaPredicted RBP18.76■□□□□ 0.59
USP6NL-204ENST00000606752 A0A0G2JMP0 313 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 A0A0X1KG70 313 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 C5orf49A4QMS7 147 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 DHRS7CA6NNS2 312 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 LYZL6O75951 148 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 IL7P13232 177 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 HOXB1P14653 301 aaPredicted RBP18.75■□□□□ 0.59
USP6NL-204ENST00000606752 THBS4P35443 961 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 ART1P52961 327 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 GABRA6Q16445 453 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 Q8N402 240 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 DTX3Q8N9I9 347 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 OR4M2Q8NGB6 313 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 OR52N4Q8NGI2 321 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 OR2AE1Q8NHA4 323 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 BOD1Q96IK1 185 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 POM121L2Q96KW2 1035 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 SORCS2Q96PQ0 1159 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 ATMQ13315 3056 aa18.75■□□□□ 0.59
USP6NL-204ENST00000606752 RAD51DO75771 328 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 CSF3P09919 207 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 COX5AP20674 150 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 CCNOP22674 350 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 C2orf76Q3KRA6 126 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 PYHIN1Q6K0P9 492 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 ZNF584Q8IVC4 421 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 GABRG1Q8N1C3 465 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 ZNF610Q8N9Z0 462 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 SEMA6DQ8NFY4 1073 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 SYNPRQ8TBG9 265 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 PP6455Q8WZ26 134 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 PIGLQ9Y2B2 252 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 NCOR2Q9Y618 2525 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 LOC100289279A0A1B0GTE1 492 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 PRRG2O14669 202 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 XRCC2O43543 280 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 NR4A2P43354 598 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 POU3F4P49335 361 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 UBE2NP61088 152 aaKnown RBP18.74■□□□□ 0.59
USP6NL-204ENST00000606752 BAIAP2L2Q6UXY1 529 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 DCDC5Q6ZRR9 648 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 MDP1Q86V88 176 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 CDH26Q8IXH8 852 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 OR5AS1Q8N127 324 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 CENPSQ8N2Z9 138 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 RPRMLQ8N4K4 120 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 C1orf162Q8NEQ5 155 aaPredicted RBP18.74■□□□□ 0.59
USP6NL-204ENST00000606752 ZCCHC14Q8WYQ9 949 aaKnown RBP18.74■□□□□ 0.59
USP6NL-204ENST00000606752 AKAP1Q92667 903 aaKnown RBP eCLIP18.74■□□□□ 0.59
USP6NL-204ENST00000606752 S100A16Q96FQ6 103 aaKnown RBP18.74■□□□□ 0.59
USP6NL-204ENST00000606752 UQCC2Q9BRT2 126 aa18.74■□□□□ 0.59
USP6NL-204ENST00000606752 METTL17Q9H7H0 456 aaPredicted RBP18.74■□□□□ 0.59
USP6NL-204ENST00000606752 PIEZO2Q9H5I5 2752 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 ALX3O95076 343 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 ALDOBP05062 364 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 SERPINA5P05154 406 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 CCL2P13500 99 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 EDN3P14138 238 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 FAHP16930 419 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
USP6NL-204ENST00000606752 APLNRP35414 380 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 DEFA1P59665 94 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 DEFA3P59666 94 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 GFRALQ6UXV0 394 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 UTS2BQ765I0 119 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms