RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, human

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-209	ENST00000604814	ATP6AP1	Q15904	470 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	C4orf26	Q17RF5	130 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	HLA-DRB5	Q30154	266 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	CEACAM21	Q3KPI0	293 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	MUC21	Q5SSG8	566 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	OR2T5	Q6IEZ7	315 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814		Q6ZVH6	145 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	DAW1	Q8N136	415 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	METTL13	Q8N6R0	699 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZFP41	Q8N8Y5	198 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	OR10R2	Q8NGX6	335 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	OR2T29	Q8NH02	315 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	OR10J5	Q8NHC4	309 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	FRAT1	Q92837	279 aa	Predicted RBP	4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZNF597	Q96LX8	424 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	RILP	Q96NA2	401 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	PITPNM3	Q9BZ71	974 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	UGT1A8	Q9HAW9	530 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	TMEM9B	Q9NQ34	198 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	DDX19A	Q9NUU7	478 aa	Known RBP	4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	PARVA	Q9NVD7	372 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZNF446	Q9NWS9	450 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	THYN1	Q9P016	225 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZNF391	Q9UJN7	358 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	GINS2	Q9Y248	185 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	SNX10	Q9Y5X0	201 aa		4.37	□□□□□ -1.71
TUBE1-209	ENST00000604814	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814		A0A0G2JLM5	398 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	DAPL1	A0PJW8	107 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	RBMY1B	A6NDE4	496 aa	Known RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	RBMY1E	A6NEQ0	496 aa	Known RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZG16	O60844	167 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	MT-ND4	P03905	459 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	PCCA	P05165	728 aa	Predicted RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	RBMY1D	P0C7P1	496 aa	Known RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	RBMY1A1	P0DJD3	496 aa	Known RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	PGA5	P0DJD9	388 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	CD37	P11049	281 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	IDO1	P14902	403 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZNF17	P17021	662 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	IGFBP5	P24593	272 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	CERS1	P27544	350 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	CSRP3	P50461	194 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	RAB38	P57729	211 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	ARG2	P78540	354 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	KIAA0141	Q14154	515 aa	Predicted RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	SMCO1	Q147U7	214 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	RBMS2	Q15434	407 aa	Known RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	TFDP3	Q5H9I0	405 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	CNIH2	Q6PI25	160 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	DHRS4L2	Q6PKH6	230 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	MRPL55	Q7Z7F7	128 aa	Known RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	THOC6	Q86W42	341 aa	Known RBP	4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	RAB43	Q86YS6	212 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	PNKD	Q8N490	385 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	OR51D1	Q8NGF3	324 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	PRSS3P2	Q8NHM4	247 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	HAVCR2	Q8TDQ0	301 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	CASTOR1	Q8WTX7	329 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	PIK3IP1	Q96FE7	263 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZNF354B	Q96LW1	612 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	CGREF1	Q99674	301 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	PECR	Q9BY49	303 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	COA1	Q9GZY4	146 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	AMBN	Q9NP70	447 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	GLTP	Q9NZD2	209 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	SMPX	Q9UHP9	88 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	FBXO5	Q9UKT4	447 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	TP53TG1	Q9Y2A0	90 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	MTUS2	Q5JR59	1369 aa		4.36	□□□□□ -1.71
TUBE1-209	ENST00000604814	STK36	Q9NRP7	1315 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	IGHV3-20	A0A0C4DH32	117 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	SMIM9	A6NGZ8	99 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	ERVV-2	B6SEH9	535 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	TRMU	O75648	421 aa	Known RBP	4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	SLC22A5	O76082	557 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	GLUD1	P00367	558 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	IFNA21	P01568	189 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	GUSB	P08236	651 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	PGA4	P0DJD7	388 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	PGA3	P0DJD8	388 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	KCNE1	P15382	129 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	ZNF12	P17014	697 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	OPRL1	P41146	370 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	NR4A2	P43354	598 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	GPR6	P46095	362 aa	Predicted RBP	4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	RPL29	P47914	159 aa	Known RBP	4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	CDK9	P50750	372 aa	Known RBP	4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	APOC4	P55056	127 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	PAX9	P55771	341 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	DLX1	P56177	255 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	SPCS2	Q15005	226 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	SLC18B1	Q6NT16	456 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	TMEM135	Q86UB9	458 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	P2RY8	Q86VZ1	359 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	C12orf29	Q8N999	325 aa		4.35	□□□□□ -1.71
TUBE1-209	ENST00000604814	TMEM178A	Q8NBL3	297 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms