RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	SRSF4	Q08170	494 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TBC1D28	Q2M2D7	210 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ELFN2	Q5R3F8	820 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ZNF776	Q68DI1	518 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PRSS35	Q8N3Z0	413 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GALM	Q96C23	342 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TAAR9	Q96RI9	348 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FAM117A	Q9C073	453 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MRPL16	Q9NX20	251 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CYB5R1	Q9UHQ9	305 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624		A0A1W2PPC4	97 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OR2T8	A6NH00	312 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TMEM200C	A6NKL6	621 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624		K7EQS6	105 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LDLRAD4	O15165	306 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CDK2AP2	O75956	126 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SLC35E2B	P0CK96	405 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GABRB1	P18505	474 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	NPBWR2	P48146	333 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MLLT11	Q13015	90 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CLPP	Q16740	277 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	BSX	Q3C1V8	233 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CMTM8	Q8IZV2	173 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CELF5	Q8N6W0	485 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	DEFB108B	Q8NET1	73 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OR4C16	Q8NGL9	310 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SRPK3	Q9UPE1	567 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GLA	P06280	429 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LAMP1	P11279	417 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ITGB7	P26010	798 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CHRNA7	P36544	502 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	KIR2DL3	P43628	341 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PJVK	Q0ZLH3	352 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SOWAHA	Q2M3V2	549 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MEIG1	Q5JSS6	88 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LDLRAD1	Q5T700	205 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FUNDC1	Q8IVP5	155 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PLPPR2	Q96GM1	343 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	EVA1A	Q9H8M9	152 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	BTNL2	Q9UIR0	455 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GDF2	Q9UK05	429 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CLPSL1	A2RUU4	121 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PRR32	B1ATL7	298 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ALDOC	P09972	364 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PBX1	P40424	430 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	DIO3	P55073	304 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	RPS15A	P62244	130 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SOX4	Q06945	474 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FAM182A	Q5T1J6	154 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LHX8	Q68G74	356 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OR8I2	Q8N0Y5	310 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SLC5A8	Q8N695	610 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OR2Z1	Q8NG97	314 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GPX8	Q8TED1	209 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	KTI12	Q96EK9	354 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	DUS3L	Q96G46	650 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CAPNS2	Q96L46	248 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CHRNA10	Q9GZZ6	450 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FAM206A	Q9NX38	181 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PIPOX	Q9P0Z9	390 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TCFL5	Q9UL49	500 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	HSPE1-MOB4	S4R3N1	261 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624		A0A1B0GTW7	788 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	P2RY10	O00398	339 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	EDIL3	O43854	480 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SFTA3	P0C7M3	94 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	YBEY	P58557	167 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GABARAPL2	P60520	117 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	KEAP1	Q14145	624 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LETMD1	Q6P1Q0	360 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PAQR6	Q6TCH4	344 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	UQCC3	Q6UW78	93 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GLIS3	Q8NEA6	775 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OR4F17	Q8NGA8	305 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	RAB1C	Q92928	201 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CPEB1	Q9BZB8	566 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MAGT1	Q9H0U3	335 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ACER3	Q9NUN7	267 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	DNAJB12	Q9NXW2	375 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MANSC4	A6NHS7	340 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GABRD	O14764	452 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OR8G3P	P0DMU2	310 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ORM2	P19652	201 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SRP14	P37108	136 aa	Known RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ERVFRD-1	P60508	538 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	S100A7L2	Q5SY68	101 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TREML2	Q5T2D2	321 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OR4C11	Q6IEV9	310 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SFXN4	Q6P4A7	337 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	VRK3	Q8IV63	474 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LGALS14	Q8TCE9	139 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	COPS9	Q8WXC6	57 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ZNF48	Q96MX3	618 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SLC6A18	Q96N87	628 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CTRC	Q99895	268 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	IFT22	Q9H7X7	185 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LHX3	Q9UBR4	397 aa		3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ELF5	Q9UKW6	265 aa	Predicted RBP	3.73	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TCRBV7S2A1N4T	A0A589	114 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms