RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 GCM1Q9NP62 436 aa13.4□□□□□ -0.26
PPFIA4-213ENST00000601609 ORC6Q9Y5N6 252 aa13.4□□□□□ -0.26
PPFIA4-213ENST00000601609 JMJD1CQ15652 2540 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 ANKRD30BLA7E2S9 258 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 IFNL4K9M1U5 179 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 ANOS1P23352 680 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 OPRL1P41146 370 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 ACTR3P61158 418 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 PRAMEF6Q5VXH4 476 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 SLX4IPQ5VYV7 408 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 FAHD2BQ6P2I3 314 aaPredicted RBP13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 LRRN1Q6UXK5 716 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 SLC16A9Q7RTY1 509 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 OR11L1Q8NGX0 322 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 FAHD2AQ96GK7 314 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 RAB3IPQ96QF0 476 aaPredicted RBP13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 IL4I1Q96RQ9 567 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 CNN2Q99439 309 aaKnown RBP13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 RBM4BQ9BQ04 359 aaKnown RBP13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 REPIN1Q9BWE0 567 aaKnown RBP13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 UFSP2Q9NUQ7 469 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 KLHDC2Q9Y2U9 406 aa13.39□□□□□ -0.27
PPFIA4-213ENST00000601609 TRAV20A0A0B4J274 112 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 CCDC182A6NF36 153 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 A6NLC8 198 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 ZAR1LA6NP61 321 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 PSMD9O00233 223 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 ZNF205O95201 554 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 IGHV2-70P01814 119 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 CFL1P23528 166 aaKnown RBP13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 EPHA2P29317 976 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 HCCSP53701 268 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 ZFP1Q6P2D0 407 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 KCTD18Q6PI47 426 aaPredicted RBP13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 BCDIN3DQ7Z5W3 292 aaKnown RBP13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 COMMD2Q86X83 199 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 C10orf67Q8IYJ2 551 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 C1orf87Q8N0U7 546 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 MUC20Q8N307 709 aaPredicted RBP13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 OR52H1Q8NGJ2 320 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 OR8S1Q8NH09 359 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 TMEM163Q8TC26 289 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 TEAD3Q99594 435 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 PKP2Q99959 881 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 YIPF3Q9GZM5 350 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 MRPL15Q9P015 296 aaKnown RBP13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 IKZF2Q9UKS7 526 aa13.38□□□□□ -0.27
PPFIA4-213ENST00000601609 SLC22A31A6NKX4 558 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 TMEM178BH3BS89 294 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 PLPP2O43688 288 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 MDH2P40926 338 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 CD200P41217 278 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 LCN2P80188 198 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 MZT1Q08AG7 82 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 ZMYND11Q15326 602 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 C12orf73Q69YU5 71 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 RHOUQ7L0Q8 258 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 MEPCEQ7L2J0 689 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 GID4Q8IVV7 300 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 BOLLQ8N9W6 283 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 SIGLEC11Q96RL6 698 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 FN3KRPQ9HA64 309 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 LRP12Q9Y561 859 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 TMEM14AQ9Y6G1 99 aa13.37□□□□□ -0.27
PPFIA4-213ENST00000601609 A0A0G2JMP0 313 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 A0A0X1KG70 313 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 GMDSO60547 372 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 PNPP00491 289 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 GRPP07492 148 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 GNALP38405 381 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 DDOSTP39656 456 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 TMEM155Q4W5P6 130 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 DCAF12L2Q5VW00 463 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 NXNL2Q5VZ03 156 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 SLC35F2Q8IXU6 374 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 OR4M2Q8NGB6 313 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 SPSB4Q96A44 273 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 SGK3Q96BR1 496 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 PAPOLGQ9BWT3 736 aaKnown RBP13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 OSBPL10Q9BXB5 764 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 GABARAPL3Q9BY60 117 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 MROQ9BYG7 248 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 NIPAL2Q9H841 368 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 GTF2A1LQ9UNN4 478 aa13.36□□□□□ -0.27
PPFIA4-213ENST00000601609 hCG_38984A0A1B0GV85 526 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 hCG_1807616A0A1W2PRN6 198 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 ZNF670-ZNF695F2Z2N8 137 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 EI24O14681 340 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 FAM20BO75063 409 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 FOXH1O75593 365 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 RPS2P15880 293 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 ALOX5APP20292 161 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 POLR2IP36954 125 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 CDC42P60953 191 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 FAM3AP98173 230 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 MAB21L1Q13394 359 aa13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 LRRC28Q86X40 367 aaPredicted RBP13.35□□□□□ -0.27
PPFIA4-213ENST00000601609 FTMTQ8N4E7 242 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms