RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 ARL8BQ9NVJ2 186 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 NOP16Q9Y3C1 178 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 A0A1B0GWJ7 208 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 POM121CA8CG34 1229 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNF593O00488 134 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 GMDSO60547 372 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 GASTP01350 101 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 FMO3P31513 532 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 CFHR2P36980 270 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 PSMB10P40306 273 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 ARF6P62330 175 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 DEFB107AQ8IZN7 70 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 PGAM4Q8N0Y7 254 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 OR8D4Q8NGM9 314 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 OR6K6Q8NGW6 343 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 ST8SIA4Q92187 359 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 LHX4Q969G2 390 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 SLAMF6Q96DU3 332 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 TSSK6Q9BXA6 273 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 CD300AQ9UGN4 299 aa14.6□□□□□ -0.07
SHKBP1-223ENST00000600552 TRAV38-1A0A0B4J264 116 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 OOEPA6NGQ2 149 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 SRRM5B3KS81 715 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNF879B4DU55 563 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 BHLHE40O14503 412 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 SNX3O60493 162 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 CCNB2O95067 398 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 SOX14O95416 240 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 FSTL3O95633 263 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 KNG1P01042 644 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 ANXA2P07355 339 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 ENTPD1P49961 510 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 NPY4RP50391 375 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 RAG2P55895 527 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 GFOD2Q3B7J2 385 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 METTL11BQ5VVY1 283 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 DRAM2Q6UX65 266 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 AQP11Q8NBQ7 271 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 OR4C15Q8NGM1 316 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 OR8S1Q8NH09 359 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 TBX15Q96SF7 602 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 BTBD10Q9BSF8 475 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 SMURF1Q9HCE7 757 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 BRD7Q9NPI1 651 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 TAGLN3Q9UI15 199 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 LYVE1Q9Y5Y7 322 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 COMMD3-BMI1R4GMX3 469 aa14.59□□□□□ -0.07
SHKBP1-223ENST00000600552 MEGF8Q7Z7M0 2845 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 ANKRD30BLA7E2S9 258 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 P2RY10O00398 339 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 KRT36O76013 467 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 CLUP10909 449 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 GMFBP60983 142 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 CRMP1Q14194 572 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 EIF2B1Q14232 305 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 TIGD6Q17RP2 521 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 RPL13AP3Q6NVV1 102 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 C16orf89Q6UX73 402 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 Q6YL49 198 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 C17orf107Q6ZR85 190 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 BTN2A1Q7KYR7 527 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 PNLDC1Q8NA58 520 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 SCCPDHQ8NBX0 429 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 GATAD2BQ8WXI9 593 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 WDFY2Q96P53 400 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 DDOQ99489 341 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 KCNJ15Q99712 375 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 CHIAQ9BZP6 476 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 BEX1Q9HBH7 125 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 ARMC1Q9NVT9 282 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 C14orf119Q9NWQ9 140 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 DNAJC27Q9NZQ0 273 aa14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 MRPL15Q9P015 296 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-223ENST00000600552 CENPVL3A0A0U1RRI6 287 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 DVL1O14640 695 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 MELTFP08582 738 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 HSD11B1P28845 292 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 CX3CR1P49238 355 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 ELF3P78545 371 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 DEFA6Q01524 100 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 MZT1Q08AG7 82 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 ZNF362Q5T0B9 420 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 FAM90A1Q86YD7 464 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 FGFRL1Q8N441 504 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 SPERTQ8NA61 448 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 OR4Q3Q8NH05 313 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 OR4F5Q8NH21 305 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 LRRC29Q8WV35 223 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 CCL13Q99616 98 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 MED20Q9H944 212 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 NOX4Q9NPH5 578 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 DNAJB11Q9UBS4 358 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 U3KQV3 271 aa14.57□□□□□ -0.08
SHKBP1-223ENST00000600552 LIPFP07098 398 aa14.56□□□□□ -0.08
SHKBP1-223ENST00000600552 SPI1P17947 270 aa14.56□□□□□ -0.08
SHKBP1-223ENST00000600552 ATP6V1B2P21281 511 aa14.56□□□□□ -0.08
SHKBP1-223ENST00000600552 GYS2P54840 703 aa14.56□□□□□ -0.08
SHKBP1-223ENST00000600552 PRB3Q04118 309 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-223ENST00000600552 RASSF6Q6ZTQ3 369 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms