RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 SLC22A4Q9H015 551 aa5□□□□□ -1.61
VRK3-220ENST00000600259 MMADHCQ9H3L0 296 aaPredicted RBP5□□□□□ -1.61
VRK3-220ENST00000600259 ANKRD19PQ9H560 264 aa5□□□□□ -1.61
VRK3-220ENST00000600259 RERGLQ9H628 205 aa5□□□□□ -1.61
VRK3-220ENST00000600259 FN3KRPQ9HA64 309 aa5□□□□□ -1.61
VRK3-220ENST00000600259 MRPL22Q9NWU5 206 aaKnown RBP5□□□□□ -1.61
VRK3-220ENST00000600259 C1orf123Q9NWV4 160 aa5□□□□□ -1.61
VRK3-220ENST00000600259 KIF17Q9P2E2 1029 aa5□□□□□ -1.61
VRK3-220ENST00000600259 FOXJ3Q9UPW0 622 aa5□□□□□ -1.61
VRK3-220ENST00000600259 ENPP4Q9Y6X5 453 aa5□□□□□ -1.61
VRK3-220ENST00000600259 DNAH9Q9NYC9 4486 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 IGHV3OR15-7A0A075B7D8 119 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 LOC100653049A0A140TA62 436 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 A0A1B0GVI7 797 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 A0A1W2PRQ8 180 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 OR6C68A6NDL8 312 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 ADARB2-AS1A8MUL3 147 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 NPFFO15130 113 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 ARPC3O15145 178 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 KRT34O76011 436 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 GRPP07492 148 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 FBP1P09467 338 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 HIST1H1CP16403 213 aaKnown RBP4.99□□□□□ -1.61
VRK3-220ENST00000600259 IFNA8P32881 189 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 LOXL3P58215 753 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 KLRD1Q13241 179 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 DGCR6Q14129 220 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 OR8B8Q15620 311 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 FAM189A2Q15884 450 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 RFX4Q33E94 735 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 IFI44LQ53G44 452 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 OXLD1Q5BKU9 147 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 WDR38Q5JTN6 314 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 GLYATL3Q5SZD4 288 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 DHRS7BQ6IAN0 325 aaPredicted RBP4.99□□□□□ -1.61
VRK3-220ENST00000600259 C1orf122Q6ZSJ8 110 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 REC114Q7Z4M0 266 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.99□□□□□ -1.61
VRK3-220ENST00000600259 GALNT4Q8N4A0 578 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 SPERTQ8NA61 448 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 SCCPDHQ8NBX0 429 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 OR2AE1Q8NHA4 323 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 C8orf46Q8TAG6 207 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 PIFOQ8TCI5 191 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 WIPF2Q8TF74 440 aaPredicted RBP4.99□□□□□ -1.61
VRK3-220ENST00000600259 C17orf50Q8WW18 174 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 SPRYD4Q8WW59 207 aaPredicted RBP4.99□□□□□ -1.61
VRK3-220ENST00000600259 ZNRF4Q8WWF5 429 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 LZICQ8WZA0 190 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 SPSB4Q96A44 273 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 ITPKCQ96DU7 683 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 RSRC1Q96IZ7 334 aaKnown RBP4.99□□□□□ -1.61
VRK3-220ENST00000600259 ATP6V1G3Q96LB4 118 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 DHRS1Q96LJ7 313 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 NMNAT3Q96T66 252 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 CCL13Q99616 98 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 PITX2Q99697 317 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 ATF6BQ99941 703 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 DCTN5Q9BTE1 182 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 MEGF9Q9H1U4 602 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 PPP1R3EQ9H7J1 279 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 RNPEPL1Q9HAU8 725 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 TRIM36Q9NQ86 728 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 SAR1AQ9NR31 198 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 SIRT7Q9NRC8 400 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 MRPL15Q9P015 296 aaKnown RBP4.99□□□□□ -1.61
VRK3-220ENST00000600259 NDUFAF4Q9P032 175 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 TMEM5Q9Y2B1 443 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 FAM96BQ9Y3D0 163 aa4.99□□□□□ -1.61
VRK3-220ENST00000600259 A0A0G2JND7 137 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 TRBV4-1A0A0J9YWV2 114 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 A0A1W2PRD5 423 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 A0A1W2PRF3 423 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 A0A1W2PRM7 423 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 BBIP1A8MTZ0 92 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 M0R135 149 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 ACOT8O14734 319 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 PIN1P1O15428 100 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 H1F0P07305 194 aaKnown RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 SELLP14151 372 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 MUC1P15941 1255 aaPredicted RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 NOS3P29474 1203 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 SAA4P35542 130 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 CENPAP49450 140 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 RPS6KA3P51812 740 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 UBE2E1P51965 193 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 TPTEP56180 551 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 LIPEQ05469 1076 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 MALLQ13021 153 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 PCK2Q16822 640 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 SLC36A3Q495N2 470 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 KLHL12Q53G59 568 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 CGB2Q6NT52 195 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 C8orf82Q6P1X6 216 aaPredicted RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 SMARCD3Q6STE5 483 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 WDR82Q6UXN9 313 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 PRSS45Q7RTY3 260 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 MRPL21Q7Z2W9 205 aaKnown RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 C11orf42Q8N5U0 333 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 FAM216BQ8N7L0 139 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms