RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 STMN2Q93045 179 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 PLEKHA8Q96JA3 519 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 PITX2Q99697 317 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 SLC30A2Q9BRI3 323 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 SSBP3Q9BWW4 388 aaPredicted RBP15.72■□□□□ 0.11
PNKP-213ENST00000599543 OSBPL10Q9BXB5 764 aa15.72■□□□□ 0.11
PNKP-213ENST00000599543 PRR23D1E9PI22 279 aaPredicted RBP15.71■□□□□ 0.11
PNKP-213ENST00000599543 F5H5P2 479 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 H0YL77 283 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 MLNRO43193 412 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 CYB5R3P00387 301 aaPredicted RBP15.71■□□□□ 0.11
PNKP-213ENST00000599543 HMGN1P05114 100 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 PRR23D2P0DMB1 279 aaPredicted RBP15.71■□□□□ 0.11
PNKP-213ENST00000599543 SLC25A1P53007 311 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 ECH1Q13011 328 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 KLHL12Q53G59 568 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 MOGAT3Q86VF5 341 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 SIGLECL1Q8N7X8 197 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 ATF6BQ99941 703 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 C1QTNF5Q9BXJ0 243 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 TMEM100Q9NV29 134 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 COMMD3-BMI1R4GMX3 469 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 MGAM2Q2M2H8 2515 aa15.71■□□□□ 0.11
PNKP-213ENST00000599543 IGHV3-64DA0A0J9YX35 117 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 F5H5K5 113 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 PRKYO43930 277 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 ZNF205O95201 554 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 SPARCP09486 303 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 ACSM4P0C7M7 580 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 ZNF823P16415 610 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 CPT2P23786 658 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 GGT2P36268 569 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 ESRRGP62508 458 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 MALLQ13021 153 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 LINC01590Q5TEZ4 76 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 BTNL3Q6UXE8 466 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 COLCA1Q6ZS62 124 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 C10orf67Q8IYJ2 551 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 C1orf87Q8N0U7 546 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 SLC29A1Q99808 456 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 RBM4BQ9BQ04 359 aaKnown RBP15.7■□□□□ 0.1
PNKP-213ENST00000599543 MIOXQ9UGB7 285 aa15.7■□□□□ 0.1
PNKP-213ENST00000599543 ZAR1LA6NP61 321 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 HLA-DPB1P04440 258 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 WNT2P09544 360 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 PAICSP22234 425 aaKnown RBP15.69■□□□□ 0.1
PNKP-213ENST00000599543 FMO3P31513 532 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 PRSS12P56730 875 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 GNB2P62879 340 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 GK2Q14410 553 aaPredicted RBP15.69■□□□□ 0.1
PNKP-213ENST00000599543 RCN1Q15293 331 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 ZNF181Q2M3W8 571 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 RSPO1Q2MKA7 263 aaPredicted RBP15.69■□□□□ 0.1
PNKP-213ENST00000599543 KRTAP27-1Q3LI81 207 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 AWAT1Q58HT5 328 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 KLF17Q5JT82 389 aaPredicted RBP15.69■□□□□ 0.1
PNKP-213ENST00000599543 SLX4IPQ5VYV7 408 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 SPATC1Q76KD6 591 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 KLBQ86Z14 1044 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 ERI1Q8IV48 349 aaKnown RBP15.69■□□□□ 0.1
PNKP-213ENST00000599543 IL4I1Q96RQ9 567 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 TMEM165Q9HC07 324 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 ZNF69Q9UC07 566 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 CYB5R1Q9UHQ9 305 aa15.69■□□□□ 0.1
PNKP-213ENST00000599543 ZNF593O00488 134 aaPredicted RBP15.68■□□□□ 0.1
PNKP-213ENST00000599543 SELENOFO60613 162 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 LCATP04180 440 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 ALPLP05186 524 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 IRF2P14316 349 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 GSTT1P30711 240 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 RPS7P62081 194 aaKnown RBP15.68■□□□□ 0.1
PNKP-213ENST00000599543 APOFQ13790 326 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 C12orf73Q69YU5 71 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 LRRN1Q6UXK5 716 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 PGAP1Q75T13 922 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 DOK3Q7L591 496 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 NLRC3Q7RTR2 1065 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 TCEANCQ8N8B7 351 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 OR6N2Q8NGY6 317 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 MAP6Q96JE9 813 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 ZMAT3Q9HA38 289 aaKnown RBP15.68■□□□□ 0.1
PNKP-213ENST00000599543 KCNG2Q9UJ96 466 aa15.68■□□□□ 0.1
PNKP-213ENST00000599543 A0A1B0GWJ7 208 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 DNAJC9-AS1A6NH13 148 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 GLCEO94923 617 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 PRTN3P24158 256 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 NAA10P41227 235 aaPredicted RBP15.67■□□□□ 0.1
PNKP-213ENST00000599543 GATA4P43694 442 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 ENTPD1P49961 510 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 TPTEP56180 551 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 PAX8Q06710 450 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 LRRC36Q1X8D7 754 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 ZNF404Q494X3 552 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 MRPL21Q7Z2W9 205 aaKnown RBP15.67■□□□□ 0.1
PNKP-213ENST00000599543 DCXRQ7Z4W1 244 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 BCL6BQ8N143 479 aaPredicted RBP15.67■□□□□ 0.1
PNKP-213ENST00000599543 CELF2-AS1Q8N7Q2 184 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 OR8B3Q8NGG8 313 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 OR10S1Q8NGN2 331 aa15.67■□□□□ 0.1
PNKP-213ENST00000599543 SGMS2Q8NHU3 365 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms